FFCP PHASE1:Hg19::chr12:4411046..4411053,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:4411046..4411053,+
|short_description=p@chr12:4411046..4411053,+
|description=CAGE_peak_at_chr12:4411046..4411053,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:4411046..4411053,+ | |||
|description=CAGE_peak_at_chr12:4411046..4411053,+ | |||
|id=chr12:4411046..4411053,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.69e-08;1!CL:0000911;3.69e-08;1!CL:0000222;3.69e-08;1!CL:0000814;3.69e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.43e-08,1;CL:0000914,5.43e-08,1;CL:0000911,5.43e-08,1;CL:0000814,5.43e-08,1;CL:0002042,5.43e-08,1;CL:0002039,5.43e-08,1;CL:0002040,5.43e-08,1;CL:0002041,5.43e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.51e-08;1!UBERON:0005425;3.69e-08;1!UBERON:0009117;8.19e-07;10!UBERON:0005564;8.19e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.51e-08;1!DOID:0060061;1.51e-08;1!DOID:8691;1.51e-08;1!DOID:9119;3.69e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.41e-08,1;DOID:0060061,1.41e-08,1;DOID:8691,1.41e-08,1;DOID:9119,3.10e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.69e-08;1!UBERON:0000941;3.69e-08;1!UBERON:0001785;3.69e-08;1!UBERON:0002464;3.69e-08;1!UBERON:0004904;3.69e-08;1!UBERON:0001021;3.69e-08;1!UBERON:0005208;3.69e-08;1!UBERON:0004145;3.69e-08;1!UBERON:0005946;3.69e-08;1!UBERON:0005965;3.69e-08;1!UBERON:0002078;3.69e-08;1!UBERON:0001052;6.14e-08;4!UBERON:0000922;2.81e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.02e-08,1;UBERON:0005208,2.02e-08,1;UBERON:0005946,2.02e-08,1;UBERON:0005965,2.02e-08,1;UBERON:0002078,2.02e-08,1;UBERON:0000941,2.33e-08,1;UBERON:0001785,2.33e-08,1;UBERON:0002464,2.33e-08,1;UBERON:0004904,2.33e-08,1;UBERON:0001021,2.33e-08,1;UBERON:0003902,2.33e-08,1;UBERON:0005425,2.33e-08,1;UBERON:0001052,4.74e-08,4 | |||
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| ||
|short_description=p@chr12:4411046..4411053,+ | |||
}} | }} |
Latest revision as of 08:30, 24 July 2015
Short description: | p@chr12:4411046..4411053, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4411046..4411053, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.43e-08 | 1 |
immature NK T cell | 5.43e-08 | 1 |
effector T cell | 5.43e-08 | 1 |
mature NK T cell | 5.43e-08 | 1 |
immature NK T cell stage IV | 5.43e-08 | 1 |
immature NK T cell stage I | 5.43e-08 | 1 |
immature NK T cell stage II | 5.43e-08 | 1 |
immature NK T cell stage III | 5.43e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.02e-08 | 1 |
right atrium valve | 2.02e-08 | 1 |
outflow tract of atrium | 2.02e-08 | 1 |
outflow part of right atrium | 2.02e-08 | 1 |
right cardiac atrium | 2.02e-08 | 1 |
cranial nerve II | 2.33e-08 | 1 |
cranial nerve | 2.33e-08 | 1 |
nerve trunk | 2.33e-08 | 1 |
nerve connecting eye with brain | 2.33e-08 | 1 |
nerve | 2.33e-08 | 1 |
retinal neural layer | 2.33e-08 | 1 |
presumptive neural retina | 2.33e-08 | 1 |
rectum | 4.74e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.41e-08 | 1 |
cutaneous T cell lymphoma | 1.41e-08 | 1 |
mycosis fungoides | 1.41e-08 | 1 |
acute myeloid leukemia | 3.10e-08 | 1 |