FFCP PHASE1:Hg19::chr12:50337005..50337016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:50337005..50337016,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr12:50337005..50337016,+ | |description=CAGE_peak_at_chr12:50337005..50337016,+ | ||
|id=chr12:50337005..50337016,+ | |id=chr12:50337005..50337016,+ | ||
|ontology_enrichment_celltype=CL:0000815!2.02e-12!2;CL:0000792!2.02e-12!2;CL:0002677!2.02e-12!2;CL:0000898!1.46e-08!3;CL:0002150!8.04e-08!3;CL:0000861!8.04e-08!3 | |ontology_enrichment_celltype=CL:0000815!2.02e-12!2;CL:0000792!2.02e-12!2;CL:0002677!2.02e-12!2;CL:0000898!1.46e-08!3;CL:0002150!8.04e-08!3;CL:0000861!8.04e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.89e-10;2!CL:0000792;1.89e-10;2!CL:0002677;1.89e-10;2!CL:0000898;2.19e-07;3!CL:0002178;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.07e-10,2;CL:0000792,2.07e-10,2;CL:0002677,2.07e-10,2;CL:0000898,2.32e-07,3;CL:0002178,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.28e-19;1!UBERON:0008801;4.28e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;3.13e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.99e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001829!2.02e-12!2;UBERON:0003127!1.33e-11!2;UBERON:0001044!3.41e-09!6;UBERON:0003293!3.41e-09!6;UBERON:0003294!3.41e-09!6;UBERON:0010047!3.41e-09!6;UBERON:0000167!3.41e-09!6;UBERON:0000078!1.49e-07!18;UBERON:0001736!4.43e-07!1;UBERON:0006298!4.43e-07!1;UBERON:0001831!5.26e-07!1;UBERON:0001567!5.26e-07!1;UBERON:0008801!5.26e-07!1;UBERON:0000989!6.60e-07!1;UBERON:0008811!6.60e-07!1;UBERON:0006258!6.60e-07!1;UBERON:0005876!6.60e-07!1;UBERON:0004874!6.60e-07!1 | |ontology_enrichment_uberon=UBERON:0001829!2.02e-12!2;UBERON:0003127!1.33e-11!2;UBERON:0001044!3.41e-09!6;UBERON:0003293!3.41e-09!6;UBERON:0003294!3.41e-09!6;UBERON:0010047!3.41e-09!6;UBERON:0000167!3.41e-09!6;UBERON:0000078!1.49e-07!18;UBERON:0001736!4.43e-07!1;UBERON:0006298!4.43e-07!1;UBERON:0001831!5.26e-07!1;UBERON:0001567!5.26e-07!1;UBERON:0008801!5.26e-07!1;UBERON:0000989!6.60e-07!1;UBERON:0008811!6.60e-07!1;UBERON:0006258!6.60e-07!1;UBERON:0005876!6.60e-07!1;UBERON:0004874!6.60e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.45e-36;2!UBERON:0001044;1.93e-27;6!UBERON:0003293;1.93e-27;6!UBERON:0003294;1.93e-27;6!UBERON:0010047;1.93e-27;6!UBERON:0003408;1.93e-27;6!UBERON:0000167;1.93e-27;6!UBERON:0001041;9.24e-21;14!UBERON:0001831;4.28e-19;1!UBERON:0001736;4.28e-19;1!UBERON:0001567;4.28e-19;1!UBERON:0004089;3.13e-10;2!UBERON:0000161;3.94e-09;19!UBERON:0000166;3.94e-09;19!UBERON:0004921;6.23e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.45e-36,2;UBERON:0001044,1.76e-27,6;UBERON:0003293,1.76e-27,6;UBERON:0003294,1.76e-27,6;UBERON:0010047,1.76e-27,6;UBERON:0000167,1.76e-27,6;UBERON:0001736,3.25e-19,1;UBERON:0006298,3.25e-19,1;UBERON:0001831,5.62e-19,1;UBERON:0001567,5.62e-19,1;UBERON:0008801,5.62e-19,1;UBERON:0003408,8.57e-17,10;UBERON:0004089,3.58e-10,2;UBERON:0000166,5.66e-08,22 | |||
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|short_description=p@chr12:50337005..50337016,+ | |short_description=p@chr12:50337005..50337016,+ | ||
}} | }} |
Latest revision as of 09:10, 24 July 2015
Short description: | p@chr12:50337005..50337016, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:50337005..50337016, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.07e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.07e-10 | 2 |
naive regulatory T cell | 2.07e-10 | 2 |
naive T cell | 2.32e-07 | 3 |
epithelial cell of stomach | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.45e-36 | 2 |
saliva-secreting gland | 1.76e-27 | 6 |
gland of oral region | 1.76e-27 | 6 |
gland of foregut | 1.76e-27 | 6 |
oral gland | 1.76e-27 | 6 |
oral cavity | 1.76e-27 | 6 |
submandibular gland | 3.25e-19 | 1 |
submandibular gland primordium | 3.25e-19 | 1 |
parotid gland | 5.62e-19 | 1 |
cheek | 5.62e-19 | 1 |
parotid gland primordium | 5.62e-19 | 1 |
gland of gut | 8.57e-17 | 10 |
midface | 3.58e-10 | 2 |
oral opening | 5.66e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.99e-10 | 2 |