FFCP PHASE1:Hg19::chr12:51633258..51633262,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:51633258..51633262,- | |||
|description=CAGE_peak_at_chr12:51633258..51633262,- | |description=CAGE_peak_at_chr12:51633258..51633262,- | ||
|id=chr12:51633258..51633262,- | |id=chr12:51633258..51633262,- | ||
|ontology_enrichment_celltype=CL:0000039!6.82e-07!7;CL:0000586!6.82e-07!7 | |ontology_enrichment_celltype=CL:0000039!6.82e-07!7;CL:0000586!6.82e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.21e-20;7!CL:0000586;2.21e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.19e-20,7;CL:0000586,1.19e-20,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.41e-07!106;DOID:0050687!8.41e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.06e-09;22!DOID:2994;7.06e-09;22!DOID:1799;1.54e-07;1!DOID:10165;1.54e-07;1!DOID:1798;1.54e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.58e-09,22;DOID:2994,4.58e-09,22;DOID:1799,1.65e-07,1;DOID:10165,1.65e-07,1;DOID:1798,1.65e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;4.41e-07;1!UBERON:0000473;5.31e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,2.98e-07,54;UBERON:0000473,4.02e-07,8;UBERON:0002323,5.79e-07,46;UBERON:0007195,7.29e-07,1;UBERON:0000991,9.23e-07,21;UBERON:0009196,9.23e-07,21;UBERON:0009117,9.23e-07,21;UBERON:0005564,9.23e-07,21 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.425208599930087,0,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0.800791974072025,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.614843499851882,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.469737994575059,0.971237666208789,1.12360645361799,1.02077085627447,1.35117749042945,0.413303124703062,0,0.247266929278557,0,0,0.673344455816265,0.875829639103749,0.277064115484183,0,0.919463387397059,0.150238058906597,0,1.25572744982203,0,0,1.20036438433761,0.103052529238439,0.772921620136887,0,1.35021065793013,0.0974370051611986,0.757301322732344,0.0920498986422993,0.646584227275248,0,0.201504196455281,0,0,0.272746120590835,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.5867062865676,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.112085143993527,0.394061520403854,0.646882724578552,1.02674429023799,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0,0.271265023699736,0.831883446123229,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0,0.521301686808497,0.195801157462741,0,0.413536052245775,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0.581051892299796,0.241718899183244,0,0.368323955743585,0,0.364182336013434,0.131124414959424,0.451199612907412,0.308061348417659,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.551346289938122,0.214840489736547,0.145016693914229,0.255679882248303,0,0,0.192190067365106,0.255225424989168,0,0.464845549297286,1.25924938732256,0.6970372701606,0,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,2.88743956579008,0.735120647943095,0,0,0.284567373393656,0,0,0,0,0,0,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,1.35227839237992,0,1.4098700508785,0.18714054040822,0,0.121360521749513,0,1.98895302764489,0,0,0.307160702099232,0,0,0.333926115068718,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0.449341755736634,0.537063524026827,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.260427761085233,0.174919999992391,0,0.796554137998498,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.41827123283581,0.0769502585037971,0.113942055847001,0.69169171316418,1.07709173291727,1.62971057883012,0,0,0,0,0,0,0.225595660617181,0,0.503464760927528,0.189753732724185,0.635746315921515,0,0,0.565412285735763,0,0.995261931078505,0.265372693510018,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.728341138602278,0,0,0,0.252746318513952,0.60129367765797,0.207376382794494,0,0.992975867626496,0,2.38944859545918,0,0.416024019039416,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.193978032976839,0.0882561266915003,0,0.822251547880505,0.397429223405979,0,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0.114536596165916,0.857974989309823,1.1524383839052,0.124252535565433,0.235694034616795,0,0.313808538937,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0.916641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| ||
|short_description=p@chr12:51633258..51633262,- | |short_description=p@chr12:51633258..51633262,- | ||
}} | }} |
Latest revision as of 09:19, 24 July 2015
Short description: | p@chr12:51633258..51633262, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:51633258..51633262, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.19e-20 | 7 |
germ cell | 1.19e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 2.98e-07 | 54 |
testis | 4.02e-07 | 8 |
body cavity | 5.79e-07 | 46 |
stroma of bone marrow | 7.29e-07 | 1 |
gonad | 9.23e-07 | 21 |
indifferent external genitalia | 9.23e-07 | 21 |
indifferent gonad | 9.23e-07 | 21 |
gonad primordium | 9.23e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.58e-09 | 22 |
germ cell cancer | 4.58e-09 | 22 |
islet cell tumor | 1.65e-07 | 1 |
endocrine pancreas cancer | 1.65e-07 | 1 |
pancreatic endocrine carcinoma | 1.65e-07 | 1 |