FFCP PHASE1:Hg19::chr12:52595451..52595478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52595451..52595478,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr12:52595451..52595478,+ | |||
|id=chr12:52595451..52595478,+ | |||
|ontology_enrichment_celltype=CL:0000243!6.20e-13!15;CL:0000125!6.20e-13!15;CL:0000030!6.20e-13!15;CL:0000339!6.20e-13!15;CL:0002586!1.33e-12!3;CL:0000095!1.48e-11!17;CL:0000123!1.48e-11!17;CL:0000149!1.12e-09!4;CL:0002319!4.43e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000243;7.91e-09;15!CL:0000125;7.91e-09;15!CL:0000095;5.35e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,7.91e-09,15;CL:0000125,7.91e-09,15;CL:0000030,7.91e-09,15;CL:0000339,7.91e-09,15;CL:0000095,5.35e-08,17;CL:0000123,5.35e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.25e-13;10!UBERON:0003056;2.31e-12;3!CL:0000339;7.91e-09;15 | |||
|ontology_enrichment_disease=DOID:3093!2.27e-18!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;4.30e-12;11!DOID:5409;1.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.30e-12,11;DOID:5409,1.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.35e-28!5;UBERON:0005388!2.35e-28!5;UBERON:0001802!2.35e-28!5;UBERON:0001894!1.88e-20!7;UBERON:0006222!1.88e-20!7;UBERON:0005743!9.62e-20!86;UBERON:0001905!5.88e-19!2;UBERON:0002757!5.88e-19!2;UBERON:0010134!5.88e-19!2;UBERON:0002784!5.88e-19!2;UBERON:0005408!5.88e-19!2;UBERON:0001899!5.88e-19!2;UBERON:0001897!2.04e-18!2;UBERON:0000073!1.13e-17!94;UBERON:0001016!1.13e-17!94;UBERON:0000970!2.85e-15!20;UBERON:0003056!3.58e-15!61;UBERON:0002104!1.59e-14!21;UBERON:0000020!3.18e-13!23;UBERON:0000955!3.83e-13!69;UBERON:0006238!3.83e-13!69;UBERON:0000033!4.10e-13!123;UBERON:0001017!5.55e-13!82;UBERON:0001032!1.18e-12!24;UBERON:0004456!1.18e-12!24;UBERON:0001781!1.33e-12!3;UBERON:0001782!1.33e-12!3;UBERON:0005424!1.33e-12!3;UBERON:0000153!2.15e-12!129;UBERON:0007811!2.15e-12!129;UBERON:0003075!2.31e-12!86;UBERON:0007284!2.31e-12!86;UBERON:0002346!9.87e-12!90;UBERON:0000019!2.35e-11!19;UBERON:0000047!2.35e-11!19;UBERON:0004088!2.35e-11!19;UBERON:0003072!2.35e-11!19;UBERON:0003071!2.35e-11!19;UBERON:0004128!2.35e-11!19;UBERON:0001456!2.93e-10!21;UBERON:0004121!3.21e-10!169;UBERON:0003296!6.07e-10!4;UBERON:0010133!6.07e-10!4;UBERON:0000924!6.35e-10!173;UBERON:0006601!6.35e-10!173;UBERON:0002581!1.17e-09!1;UBERON:0007625!1.34e-07!11;UBERON:0005085!2.22e-07!29;UBERON:0002780!5.26e-07!41;UBERON:0001890!5.26e-07!41;UBERON:0006240!5.26e-07!41;UBERON:0003080!7.86e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;1.16e-73;4!UBERON:0001905;7.72e-66;2!UBERON:0002757;7.72e-66;2!UBERON:0010134;7.72e-66;2!UBERON:0005408;7.72e-66;2!UBERON:0001899;7.72e-66;2!UBERON:0001894;1.42e-42;7!UBERON:0003296;1.38e-33;4!UBERON:0010133;1.38e-33;4!UBERON:0001897;1.07e-17;2!UBERON:0010225;1.07e-17;2!UBERON:0000955;3.08e-08;68!UBERON:0000966;6.13e-08;5!UBERON:0005388;6.13e-08;5!UBERON:0001802;6.13e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.16e-73,4;UBERON:0001905,7.73e-66,2;UBERON:0002757,7.73e-66,2;UBERON:0010134,7.73e-66,2;UBERON:0005408,7.73e-66,2;UBERON:0001899,7.73e-66,2;UBERON:0001894,1.42e-42,7;UBERON:0006222,1.42e-42,7;UBERON:0003296,1.38e-33,4;UBERON:0010133,1.38e-33,4;UBERON:0001897,1.07e-17,2;UBERON:0010225,1.07e-17,2;UBERON:0000955,3.09e-12,68;UBERON:0006238,3.09e-12,68;UBERON:0001017,2.17e-10,81;UBERON:0001016,2.05e-09,89;UBERON:0003056,4.72e-09,61;UBERON:0002780,8.93e-08,41;UBERON:0001890,8.93e-08,41;UBERON:0003080,8.93e-08,41;UBERON:0006240,8.93e-08,41;UBERON:0003075,6.96e-07,82;UBERON:0007284,6.96e-07,82;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
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|short_description=p@chr12:52595451..52595478,+ | |||
}} | }} |
Latest revision as of 09:29, 24 July 2015
Short description: | p@chr12:52595451..52595478, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52595451..52595478, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 7.91e-09 | 15 |
glial cell | 7.91e-09 | 15 |
glioblast | 7.91e-09 | 15 |
glioblast (sensu Vertebrata) | 7.91e-09 | 15 |
neuron associated cell | 5.35e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.35e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 1.16e-73 | 4 |
pineal body | 7.73e-66 | 2 |
regional part of epithalamus | 7.73e-66 | 2 |
secretory circumventricular organ | 7.73e-66 | 2 |
circumventricular organ | 7.73e-66 | 2 |
epithalamus | 7.73e-66 | 2 |
diencephalon | 1.42e-42 | 7 |
future diencephalon | 1.42e-42 | 7 |
gland of diencephalon | 1.38e-33 | 4 |
neuroendocrine gland | 1.38e-33 | 4 |
dorsal plus ventral thalamus | 1.07e-17 | 2 |
thalamic complex | 1.07e-17 | 2 |
brain | 3.09e-12 | 68 |
future brain | 3.09e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
nervous system | 2.05e-09 | 89 |
pre-chordal neural plate | 4.72e-09 | 61 |
regional part of forebrain | 8.93e-08 | 41 |
forebrain | 8.93e-08 | 41 |
anterior neural tube | 8.93e-08 | 41 |
future forebrain | 8.93e-08 | 41 |
neural plate | 6.96e-07 | 82 |
presumptive neural plate | 6.96e-07 | 82 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.30e-12 | 11 |
lung small cell carcinoma | 1.22e-09 | 4 |