FFCP PHASE1:Hg19::chr12:53494574..53494607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53494574..53494607,+ | |||
|description=CAGE_peak_at_chr12:53494574..53494607,+ | |description=CAGE_peak_at_chr12:53494574..53494607,+ | ||
|id=chr12:53494574..53494607,+ | |id=chr12:53494574..53494607,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.72e-14!180;CL:0000057!1.45e-12!75;CL:0000680!1.15e-08!57;CL:0000056!1.15e-08!57;CL:0000355!1.15e-08!57;CL:0000187!2.87e-08!54;CL:0000183!6.42e-08!59 | |ontology_enrichment_celltype=CL:0000055!6.72e-14!180;CL:0000057!1.45e-12!75;CL:0000680!1.15e-08!57;CL:0000056!1.15e-08!57;CL:0000355!1.15e-08!57;CL:0000187!2.87e-08!54;CL:0000183!6.42e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.35e-08;5!CL:0000135;4.61e-08;3!CL:0000388;4.61e-08;3!CL:0000499;4.57e-07;28!CL:0000153;6.49e-07;9!CL:0000447;6.49e-07;9!CL:0002593;9.57e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.08e-08,5;CL:0000135,3.14e-08,3;CL:0000388,3.14e-08,3;CL:0000499,3.07e-07,28;CL:0000153,3.53e-07,9;CL:0000447,3.53e-07,9;CL:0002593,9.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.37e-09;3!DOID:127;8.37e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.78e-09,3;DOID:127,9.78e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.17e-09!95;UBERON:0002385!4.21e-09!63;UBERON:0001015!4.21e-09!63;UBERON:0000383!4.21e-09!63;UBERON:0001134!9.69e-09!61;UBERON:0002036!9.69e-09!61;UBERON:0003082!9.69e-09!61;UBERON:0000914!9.80e-09!83;UBERON:0002329!9.80e-09!83;UBERON:0003077!9.80e-09!83;UBERON:0003059!9.80e-09!83;UBERON:0007282!9.80e-09!83;UBERON:0009618!9.80e-09!83;UBERON:0007285!9.80e-09!83;UBERON:0002100!2.57e-08!216;UBERON:0004290!6.60e-08!70;UBERON:0000486!1.33e-07!82;UBERON:0005256!1.52e-07!143;UBERON:0000475!3.83e-07!365;UBERON:0004122!7.54e-07!15;UBERON:0005156!7.91e-07!59;UBERON:0000990!7.91e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.70e-11;8!UBERON:0000982;3.70e-11;8!UBERON:0004770;3.70e-11;8!UBERON:0003834;1.35e-08;5!UBERON:0001533;1.35e-08;5!UBERON:0011135;4.61e-08;5!UBERON:0002216;4.61e-08;5!UBERON:0011134;4.61e-08;5!UBERON:0002209;4.61e-08;5!UBERON:0002213;4.61e-08;5!UBERON:0007844;4.61e-08;5!UBERON:0011138;4.61e-08;5!UBERON:0001130;4.61e-08;5!UBERON:0001066;4.61e-08;5!UBERON:0001468;4.61e-08;5!UBERON:0007846;4.61e-08;3!UBERON:0000043;4.61e-08;3!UBERON:0007845;4.61e-08;3!UBERON:0002456;9.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,2.52e-11,8;UBERON:0000982,2.52e-11,8;UBERON:0004770,2.52e-11,8;UBERON:0003834,1.08e-08,5;UBERON:0001533,1.08e-08,5;UBERON:0007846,3.14e-08,3;UBERON:0000043,3.14e-08,3;UBERON:0007845,3.14e-08,3;UBERON:0011135,3.24e-08,5;UBERON:0002216,3.24e-08,5;UBERON:0011134,3.24e-08,5;UBERON:0002209,3.24e-08,5;UBERON:0002213,3.24e-08,5;UBERON:0005856,3.24e-08,5;UBERON:0005866,3.24e-08,5;UBERON:0005863,3.24e-08,5;UBERON:0007844,3.24e-08,5;UBERON:0011138,3.24e-08,5;UBERON:0001130,3.24e-08,5;UBERON:0001066,3.24e-08,5;UBERON:0001468,3.24e-08,5;UBERON:0002456,9.93e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0.893922188854576,0.872338524100369,0,1.89515962028049,0.261185628199839,0,0,0,0.263766978228454,1.11389717664042,2.65117900582333,0,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,1.80719576192283,0,1.73815822752988,0,1.45990461090791,0.0945348171640679,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.397227542439656,4.58938593198102,1.06400514659507,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0.570471821544449,0.896692083310806,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,1.23633464639278,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0.612975591598039,1.50238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0.211931901159562,1.20036438433761,0.721367704669072,0.772921620136887,1.11670113798954,0.675105328965065,0.584622030967192,0.504867548488229,0.184099797284599,1.13152239773168,0.355009592516614,0.302256294682921,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0.258543431515556,7.15312891703765,0.845302752556,1.32969058292435,1.04007436911366,0,1.41849132023278,0.799266537048298,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.599837947092342,0,0,0,0,0,0,1.01346914667305,0.410952645100767,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,1.89885516589815,0.623912584592421,1.42743191037729,0.315404830067869,0.702848489956279,0,6.82222512167955,3.10419213877515,0,0.184369168541703,1.21637060255316,0,0.686286847621712,0,0,0,0.606255142892519,0,0,0.744323423456331,0,0.841980283299221,1.66580894032411,0.511707249066704,0.321707842287215,2.96836132889982,0.308419387605311,1.77561725313127,0.574890092096664,1.03850885836724,1.85936605535935,0.120859449591622,1.00253235151642,0.184161977871793,0.229628896329213,0.546273504020151,4.58935452357984,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0.656029291399411,0,0.309123034943167,0,0,0,0,4.82051789532479,0.773365746336976,0.154048617114644,0.307007349452259,0.275673144969061,0.322260734604821,1.0151168573996,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0.929691098594572,1.25924938732256,0,0.924100740528266,1.59691809095107,0,0.37064843820784,0.858749320451947,0,0,0.190630193923825,0.767693373934002,0,0.318203247925937,0.78494864019923,0.359744915166629,0,0,0.202182481573316,0,0,0,3.1682753652067,6.33900880540533,0.818999468447914,1.1312434556297,3.39024349860728,1.65409603063837,0.66343897524122,1.31535265576129,0,0.655894752046633,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0,0.709522128141196,7.38876723541824,3.62224382255892,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0.111443384277478,1.42068073403207,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0,0,1.19548792950642,0.552567831062295,0,0,0,0,0,0,0,1.87422470710174,0,2.22273980289274,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0.557694977114413,2.23155749661011,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0.489961987071888,0.174118413160805,4.36816670605075,0.859930162358083,0,0,0,1.64881328030313,0,1.35588444468319,0.411125773940253,0,0,0,0,0.640358984218058,0.39961921916426,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68347750079413,0.0788057072991982,0,0.105600336519406,0,0,0.714695326373367,0,0,5.97299561929084,4.32110745600634,1.30634944043764,0,0,1.02232813071253,0.453248366080503,0.146552233678082,0,0,0,0,0,0.533937062838473,0.314408610199332,0.828478110694391,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,3.05845565607623,0,0,0.74627401443437,0.701139929541673,0,0.568209015825267,0.25156790175257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| ||
|short_description=p@chr12:53494574..53494607,+ | |short_description=p@chr12:53494574..53494607,+ | ||
}} | }} |
Latest revision as of 09:46, 24 July 2015
Short description: | p@chr12:53494574..53494607, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53494574..53494607, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.08e-08 | 5 |
fibrocyte | 3.14e-08 | 3 |
tendon cell | 3.14e-08 | 3 |
stromal cell | 3.07e-07 | 28 |
GAG secreting cell | 3.53e-07 | 9 |
carbohydrate secreting cell | 3.53e-07 | 9 |
smooth muscle cell of the internal thoracic artery | 9.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
articulation | 2.52e-11 | 8 |
skeletal joint | 2.52e-11 | 8 |
articular system | 2.52e-11 | 8 |
thoracic segment blood vessel | 1.08e-08 | 5 |
subclavian artery | 1.08e-08 | 5 |
dense regular connective tissue | 3.14e-08 | 3 |
tendon | 3.14e-08 | 3 |
regular connective tissue | 3.14e-08 | 3 |
intervertebral cartilage | 3.24e-08 | 5 |
symphysis | 3.24e-08 | 5 |
nonsynovial joint | 3.24e-08 | 5 |
fibrous joint | 3.24e-08 | 5 |
cartilaginous joint | 3.24e-08 | 5 |
developing mesenchymal condensation | 3.24e-08 | 5 |
pre-cartilage condensation | 3.24e-08 | 5 |
cartilaginous condensation | 3.24e-08 | 5 |
cartilage element | 3.24e-08 | 5 |
post-cranial axial skeletal system | 3.24e-08 | 5 |
vertebral column | 3.24e-08 | 5 |
intervertebral disk | 3.24e-08 | 5 |
intervertebral joint | 3.24e-08 | 5 |
internal thoracic artery | 9.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.78e-09 | 3 |
leiomyoma | 9.78e-09 | 3 |