FFCP PHASE1:Hg19::chr12:6346975..6347034,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6346975..6347034,+
|short_description=p@chr12:6346975..6347034,+
|description=CAGE_peak_at_chr12:6346975..6347034,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:6346975..6347034,+ | |||
|coexpression_cluster_id=C2228 | |||
|description=CAGE_peak_at_chr12:6346975..6347034,+ | |||
|id=chr12:6346975..6347034,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.34e-21!254;CL:0002078!1.43e-14!44;CL:0000115!1.86e-12!35;CL:0002139!8.49e-11!24;CL:0000213!1.55e-10!57;CL:0000215!1.55e-10!57;CL:0000071!4.18e-09!18;CL:0002546!4.18e-09!18;CL:0000076!8.29e-08!62;CL:0002321!1.31e-07!248;CL:0000220!2.21e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.70e-12;36!CL:0002139;3.64e-12;24!CL:0002078;2.45e-11;45!CL:0000071;4.06e-10;18!CL:1000413;4.29e-07;9!CL:0000213;9.99e-07;58!CL:0000215;9.99e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.54e-20,253;CL:0002078,8.60e-17,45;CL:0000115,2.28e-14,36;CL:0002139,4.32e-12,24;CL:0000213,5.83e-11,58;CL:0000215,5.83e-11,58;CL:0000071,4.71e-10,18;CL:0002546,4.71e-10,18;CL:0002321,4.62e-07,250;CL:1000413,5.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.06e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.12e-17!659;UBERON:0000467!9.44e-16!625;UBERON:0000480!1.01e-15!626;UBERON:0000922!1.75e-15!612;UBERON:0002050!1.37e-13!605;UBERON:0005423!1.37e-13!605;UBERON:0000923!3.02e-13!604;UBERON:0005291!3.02e-13!604;UBERON:0006598!3.02e-13!604;UBERON:0002532!3.02e-13!604;UBERON:0000487!7.26e-10!22;UBERON:0006914!1.04e-09!25;UBERON:0000062!1.82e-09!511;UBERON:0001986!4.18e-09!18;UBERON:0004638!4.18e-09!18;UBERON:0004852!4.18e-09!18;UBERON:0000477!2.85e-08!286;UBERON:0000926!5.00e-08!448;UBERON:0004120!5.00e-08!448;UBERON:0006603!5.00e-08!448;UBERON:0004111!7.64e-08!241;UBERON:0004119!1.32e-07!169;UBERON:0000925!1.32e-07!169;UBERON:0006595!1.32e-07!169;UBERON:0000464!1.79e-07!104;UBERON:0001004!3.93e-07!72;UBERON:0000055!4.47e-07!69;UBERON:0001007!6.23e-07!155;UBERON:0001555!6.23e-07!155;UBERON:0007026!6.23e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;9.90e-11;22!UBERON:0006914;2.41e-10;25!UBERON:0004638;4.06e-10;18!UBERON:0001986;4.06e-10;18!UBERON:0004852;4.06e-10;18!UBERON:0000490;1.04e-07;33!UBERON:0003915;4.29e-07;9!UBERON:0004700;4.29e-07;9!UBERON:0001917;4.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.18e-10,22;UBERON:0006914,2.09e-10,25;UBERON:0004638,4.71e-10,18;UBERON:0001986,4.71e-10,18;UBERON:0004852,4.71e-10,18;UBERON:0000922,6.46e-08,592;UBERON:0000055,3.10e-07,68;UBERON:0003915,5.26e-07,9;UBERON:0004700,5.26e-07,9;UBERON:0001917,5.26e-07,9;UBERON:0004119,7.68e-07,160;UBERON:0000925,7.68e-07,160;UBERON:0006595,7.68e-07,160 | |||
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| ||
|short_description=p@chr12:6346975..6347034,+ | |||
}} | }} |
Latest revision as of 11:11, 24 July 2015
Short description: | p@chr12:6346975..6347034, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6346975..6347034, + |
Coexpression cluster: | C2228_Monocytederived_seminal_leiomyoma_Renal_Wilms_Endothelial_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.54e-20 | 253 |
meso-epithelial cell | 8.60e-17 | 45 |
endothelial cell | 2.28e-14 | 36 |
endothelial cell of vascular tree | 4.32e-12 | 24 |
lining cell | 5.83e-11 | 58 |
barrier cell | 5.83e-11 | 58 |
blood vessel endothelial cell | 4.71e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.71e-10 | 18 |
embryonic cell | 4.62e-07 | 250 |
endothelial cell of artery | 5.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.18e-10 | 22 |
squamous epithelium | 2.09e-10 | 25 |
blood vessel endothelium | 4.71e-10 | 18 |
endothelium | 4.71e-10 | 18 |
cardiovascular system endothelium | 4.71e-10 | 18 |
embryo | 6.46e-08 | 592 |
vessel | 3.10e-07 | 68 |
endothelial tube | 5.26e-07 | 9 |
arterial system endothelium | 5.26e-07 | 9 |
endothelium of artery | 5.26e-07 | 9 |
endoderm-derived structure | 7.68e-07 | 160 |
endoderm | 7.68e-07 | 160 |
presumptive endoderm | 7.68e-07 | 160 |