FFCP PHASE1:Hg19::chr12:67208365..67208370,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:67208365..67208370,- | |||
|coexpression_cluster_id=C1683 | |coexpression_cluster_id=C1683 | ||
|description=CAGE_peak_at_chr12:67208365..67208370,- | |description=CAGE_peak_at_chr12:67208365..67208370,- | ||
|id=chr12:67208365..67208370,- | |id=chr12:67208365..67208370,- | ||
|ontology_enrichment_celltype=CL:0000039!2.72e-07!7;CL:0000586!2.72e-07!7 | |ontology_enrichment_celltype=CL:0000039!2.72e-07!7;CL:0000586!2.72e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.57e-07;1!CL:0000164;2.57e-07;1!CL:0000502;2.57e-07;1!CL:0000172;2.57e-07;1!CL:0000173;2.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.40e-07,1;CL:0000164,3.40e-07,1;CL:0000502,3.40e-07,1;CL:0000172,3.40e-07,1;CL:0000173,3.40e-07,1;CL:0002351,3.40e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.17e-13;2!UBERON:0005754;7.02e-08;1!CL:0002351;2.57e-07;1!UBERON:0003124;2.57e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.28e-07!143 | |ontology_enrichment_disease=DOID:0050687!3.28e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1799;6.58e-08;1!DOID:10165;6.58e-08;1!DOID:1798;6.58e-08;1!DOID:4430;2.57e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.59e-08,1;DOID:10165,6.59e-08,1;DOID:1798,6.59e-08,1;DOID:4430,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!4.69e-17!41;UBERON:0001890!4.69e-17!41;UBERON:0006240!4.69e-17!41;UBERON:0003080!2.06e-16!42;UBERON:0001893!1.08e-14!34;UBERON:0003056!1.09e-14!61;UBERON:0002791!3.96e-14!33;UBERON:0002020!7.08e-14!34;UBERON:0003528!7.08e-14!34;UBERON:0001869!7.83e-14!32;UBERON:0007023!4.97e-13!115;UBERON:0001049!3.11e-12!57;UBERON:0005068!3.11e-12!57;UBERON:0006241!3.11e-12!57;UBERON:0007135!3.11e-12!57;UBERON:0002346!5.56e-12!90;UBERON:0003075!1.21e-11!86;UBERON:0007284!1.21e-11!86;UBERON:0002616!1.77e-11!59;UBERON:0000955!7.91e-11!69;UBERON:0006238!7.91e-11!69;UBERON:0000033!4.42e-10!123;UBERON:0000153!4.78e-10!129;UBERON:0007811!4.78e-10!129;UBERON:0001017!1.23e-09!82;UBERON:0005743!2.29e-09!86;UBERON:0000073!2.40e-09!94;UBERON:0001016!2.40e-09!94;UBERON:0002619!3.40e-09!22;UBERON:0000924!4.21e-09!173;UBERON:0006601!4.21e-09!173;UBERON:0004121!9.44e-09!169;UBERON:0003135!1.14e-08!11;UBERON:0000956!1.63e-08!25;UBERON:0000203!1.63e-08!25;UBERON:0009663!1.02e-07!7;UBERON:0001950!1.48e-07!20;UBERON:0002308!2.07e-07!9;UBERON:0000125!2.07e-07!9;UBERON:0002420!2.29e-07!9;UBERON:0007245!2.29e-07!9;UBERON:0010009!2.29e-07!9;UBERON:0010011!2.29e-07!9;UBERON:0000454!2.29e-07!9 | |ontology_enrichment_uberon=UBERON:0002780!4.69e-17!41;UBERON:0001890!4.69e-17!41;UBERON:0006240!4.69e-17!41;UBERON:0003080!2.06e-16!42;UBERON:0001893!1.08e-14!34;UBERON:0003056!1.09e-14!61;UBERON:0002791!3.96e-14!33;UBERON:0002020!7.08e-14!34;UBERON:0003528!7.08e-14!34;UBERON:0001869!7.83e-14!32;UBERON:0007023!4.97e-13!115;UBERON:0001049!3.11e-12!57;UBERON:0005068!3.11e-12!57;UBERON:0006241!3.11e-12!57;UBERON:0007135!3.11e-12!57;UBERON:0002346!5.56e-12!90;UBERON:0003075!1.21e-11!86;UBERON:0007284!1.21e-11!86;UBERON:0002616!1.77e-11!59;UBERON:0000955!7.91e-11!69;UBERON:0006238!7.91e-11!69;UBERON:0000033!4.42e-10!123;UBERON:0000153!4.78e-10!129;UBERON:0007811!4.78e-10!129;UBERON:0001017!1.23e-09!82;UBERON:0005743!2.29e-09!86;UBERON:0000073!2.40e-09!94;UBERON:0001016!2.40e-09!94;UBERON:0002619!3.40e-09!22;UBERON:0000924!4.21e-09!173;UBERON:0006601!4.21e-09!173;UBERON:0004121!9.44e-09!169;UBERON:0003135!1.14e-08!11;UBERON:0000956!1.63e-08!25;UBERON:0000203!1.63e-08!25;UBERON:0009663!1.02e-07!7;UBERON:0001950!1.48e-07!20;UBERON:0002308!2.07e-07!9;UBERON:0000125!2.07e-07!9;UBERON:0002420!2.29e-07!9;UBERON:0007245!2.29e-07!9;UBERON:0010009!2.29e-07!9;UBERON:0010011!2.29e-07!9;UBERON:0000454!2.29e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.17e-13;2!UBERON:0006947;1.32e-09;3!UBERON:0004054;1.32e-09;3!UBERON:0005383;2.14e-09;3!UBERON:0005382;2.14e-09;3!UBERON:0002114;2.80e-09;2!UBERON:0000998;7.02e-08;1!UBERON:0006868;7.02e-08;1!UBERON:0001000;8.80e-08;1!UBERON:0005352;8.80e-08;1!UBERON:0002134;1.14e-07;1!UBERON:0005208;1.14e-07;1!UBERON:0004145;1.14e-07;1!UBERON:0005946;1.14e-07;1!UBERON:0005965;1.14e-07;1!UBERON:0002078;1.14e-07;1!UBERON:0000922;1.80e-07;49!UBERON:0005904;2.11e-07;4!UBERON:0000369;3.01e-07;4!UBERON:0002435;3.01e-07;4!UBERON:0000204;3.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.18e-13,2;UBERON:0010122,1.18e-13,2;UBERON:0006947,1.30e-09,3;UBERON:0004054,1.30e-09,3;UBERON:0005383,2.15e-09,3;UBERON:0005382,2.15e-09,3;UBERON:0002114,4.32e-09,2;UBERON:0000998,7.03e-08,1;UBERON:0006868,7.03e-08,1;UBERON:0001000,8.54e-08,1;UBERON:0005352,8.54e-08,1;UBERON:0002134,1.18e-07,1;UBERON:0005208,1.18e-07,1;UBERON:0005946,1.18e-07,1;UBERON:0005965,1.18e-07,1;UBERON:0002078,1.18e-07,1;UBERON:0005904,2.08e-07,4;UBERON:0000369,3.02e-07,4;UBERON:0002435,3.02e-07,4;UBERON:0000204,3.02e-07,4;UBERON:0010082,3.02e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.601519410909855,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.422008249231538,0.556543525114529,0,0,0,0.276283915531148,0,0,0,0,0,0.716084698702437,0,0,0,0,1.93866549219044,0,0,0.520855522170466,0.0874599999961957,0,0,0.508507300585533,0,0,1.16641845353302,0.173624994933292,2.65722415744152,2.05013945663194,0,0,0,0,0,0.278847488557207,0,0,0.46112780877612,0.269272933229316,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0.702793337176017,0,0,0,3.55125962564451,0,3.67287313956588,0,0.450970258243478,0.103688191397247,0.664653872707185,0,0.313932918407225,1.19472429772959,1.99226682220855,0,0.520679215005393,0,0.174118413160805,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.126621591911757,0.195551382734803,0.160317640503067,0.213452994739353,0.19980960958213,0.144090417154106,0,1.20116498503375,0,0,0.707082103850386,0,0,0,0,0.600420288709789,0.821432273351958,0,0.429765441419957,0,0.279282401272254,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0.964518890790115,0,0,0.2249738915515,0.77380195455795,0.182248669974074,0.335434687599266,0.157611414598396,0,0.316801009558219,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.372578417648301,0.553394539744923,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,3.21662387062389,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0.438568099157414,0.706756583783524,1.15748422962549,0.168942440653073,0,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0.786329709279482,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0.23658523500376,0.80057074828547,0,0,0.128458450192919,0,0.319267718114302,0.41023272848151,2.52071696221718,0.0691572524642179,0.968853873791107,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,7.85720083444267,0,0,0.202612753855184,0,1.2401207790071,0.126831620387814,3.28184885410932,0,0.992422356778588,0,0.127762427639595,1.07140367175657,0,0,0.227662191351298,1.1531308121143,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0.942693539496011,0,1.82631744101899,0,0,0,1.58013611732727,1.51113852978563,0.173858272302579,0,0.62164849248911,0.3414369541879,0.691259661814092,0.430227358820278,0,0,5.08064460229115,1.14553434272025,0,0.955538938977433,0.223710863595585,0,0,0,0,0,0,0.701818390386317,1.19370465096821,0.356760272332706,0,0,0,0.0771741581079447,0,0,0.245148321753905,1.17838273550813,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0.458729283404541,0.143339583151451,0.315543124386369,0.0679914901909147,4.36350690340377,1.0580536810308,0,0,0,0,0.109265571963696,0,0.407955318967927,0.534434810531121,0.643264296743914,0.250707539292375,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0.25458863311266,1.21270313374932,0.217716747896961,0.342233301085281,0,0.0717222053926763,1.66330178273007,0.162806537221949,0.213454691755431,0,0,0,0.366724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| ||
|short_description=p@chr12:67208365..67208370,- | |short_description=p@chr12:67208365..67208370,- | ||
}} | }} |
Latest revision as of 11:34, 24 July 2015
Short description: | p@chr12:67208365..67208370, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:67208365..67208370, - |
Coexpression cluster: | C1683_pancreatic_somatostatinoma_temporal_mesothelioma_occipital_seminal_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.40e-07 | 1 |
enteroendocrine cell | 3.40e-07 | 1 |
type D enteroendocrine cell | 3.40e-07 | 1 |
somatostatin secreting cell | 3.40e-07 | 1 |
pancreatic D cell | 3.40e-07 | 1 |
progenitor cell of endocrine pancreas | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.18e-13 | 2 |
future caudate nucleus | 1.18e-13 | 2 |
male genital duct | 1.30e-09 | 3 |
internal male genitalia | 1.30e-09 | 3 |
caudate-putamen | 2.15e-09 | 3 |
dorsal striatum | 2.15e-09 | 3 |
duodenum | 4.32e-09 | 2 |
seminal vesicle | 7.03e-08 | 1 |
seminal fluid secreting gland | 7.03e-08 | 1 |
vas deferens | 8.54e-08 | 1 |
spermatic cord | 8.54e-08 | 1 |
tricuspid valve | 1.18e-07 | 1 |
right atrium valve | 1.18e-07 | 1 |
outflow tract of atrium | 1.18e-07 | 1 |
outflow part of right atrium | 1.18e-07 | 1 |
right cardiac atrium | 1.18e-07 | 1 |
duct of male reproductive system | 2.08e-07 | 4 |
corpus striatum | 3.02e-07 | 4 |
striatum | 3.02e-07 | 4 |
ventral part of telencephalon | 3.02e-07 | 4 |
future corpus striatum | 3.02e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.59e-08 | 1 |
endocrine pancreas cancer | 6.59e-08 | 1 |
pancreatic endocrine carcinoma | 6.59e-08 | 1 |
somatostatinoma | 3.40e-07 | 1 |