FFCP PHASE1:Hg19::chr12:9067566..9067591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9067566..9067591,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr12:9067566..9067591,+ | |description=CAGE_peak_at_chr12:9067566..9067591,+ | ||
|id=chr12:9067566..9067591,+ | |id=chr12:9067566..9067591,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.59e-08!7;CL:0000586!2.59e-08!7;CL:0002322!3.20e-07!5 | |ontology_enrichment_celltype=CL:0000039!2.59e-08!7;CL:0000586!2.59e-08!7;CL:0002322!3.20e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.09e-39;5!CL:0000039;2.85e-28;7!CL:0000586;2.85e-28;7!CL:0002321;1.79e-18;15!CL:0000540;2.23e-12;6!CL:0000404;2.23e-12;6!CL:0000228;7.85e-09;1!CL:0002372;7.85e-09;1!CL:0000148;1.07e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.09e-39,5;CL:0000039,3.02e-28,7;CL:0000586,3.02e-28,7;CL:0000540,2.06e-12,6;CL:0000031,2.06e-12,6;CL:0000404,2.06e-12,6;CL:0000047,1.96e-09,8;CL:0000228,6.72e-09,1;CL:0002372,6.72e-09,1;CL:0000148,1.12e-07,10;CL:0000541,1.12e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.48e-13;10!UBERON:0005564;5.48e-13;10!CL:0000031;2.23e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.03e-12;22!DOID:2994;2.03e-12;22!DOID:1799;4.54e-09;1!DOID:10165;4.54e-09;1!DOID:1798;4.54e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.88e-12,22;DOID:2994,1.88e-12,22;DOID:1799,4.54e-09,1;DOID:10165,4.54e-09,1;DOID:1798,4.54e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.45e-16;8!UBERON:0003135;8.03e-12;11!UBERON:0000922;1.01e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.45e-16,8;UBERON:0003135,8.04e-12,11 | |||
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| ||
|short_description=p@chr12:9067566..9067591,+ | |short_description=p@chr12:9067566..9067591,+ | ||
}} | }} |
Latest revision as of 13:26, 24 July 2015
Short description: | p@chr12:9067566..9067591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9067566..9067591, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.09e-39 | 5 |
germ line cell | 3.02e-28 | 7 |
germ cell | 3.02e-28 | 7 |
neuron | 2.06e-12 | 6 |
neuroblast | 2.06e-12 | 6 |
electrically signaling cell | 2.06e-12 | 6 |
neuronal stem cell | 1.96e-09 | 8 |
multinucleate cell | 6.72e-09 | 1 |
myotube | 6.72e-09 | 1 |
melanocyte | 1.12e-07 | 10 |
melanoblast | 1.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 3.45e-16 | 8 |
male reproductive organ | 8.04e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.88e-12 | 22 |
germ cell cancer | 1.88e-12 | 22 |
islet cell tumor | 4.54e-09 | 1 |
endocrine pancreas cancer | 4.54e-09 | 1 |
pancreatic endocrine carcinoma | 4.54e-09 | 1 |