FFCP PHASE1:Hg19::chr13:110840203..110840210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110840203..110840210,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr13:110840203..110840210,- | |description=CAGE_peak_at_chr13:110840203..110840210,- | ||
|id=chr13:110840203..110840210,- | |id=chr13:110840203..110840210,- | ||
|ontology_enrichment_celltype=CL:0002588!1.36e-12!2;CL:0002569!1.88e-09!6;CL:0002568!7.29e-07!1;CL:0002557!8.18e-07!1;CL:0002594!9.76e-07!4 | |ontology_enrichment_celltype=CL:0002588!1.36e-12!2;CL:0002569!1.88e-09!6;CL:0002568!7.29e-07!1;CL:0002557!8.18e-07!1;CL:0002594!9.76e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002569;7.58e-23;6!CL:0000349;6.36e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,7.58e-23,6;CL:0000349,6.36e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.58e-34;1!UBERON:0004161;4.66e-13;11!UBERON:0009497;3.30e-11;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!9.17e-10!10;UBERON:0000358!9.17e-10!10;UBERON:0000307!9.17e-10!10;UBERON:0000091!9.17e-10!10;UBERON:0000087!9.17e-10!10;UBERON:0007806!9.17e-10!10;UBERON:0008780!9.17e-10!10;UBERON:0005728!9.17e-10!10;UBERON:0003422!1.88e-09!6;UBERON:0003914!8.08e-08!118;UBERON:0001282!1.65e-07!1;UBERON:0009842!1.65e-07!1;UBERON:0003704!1.65e-07!1;UBERON:0001171!1.65e-07!1;UBERON:0001172!1.65e-07!1;UBERON:0004872!1.92e-07!84;UBERON:0005418!2.10e-07!1;UBERON:0001389!2.10e-07!1;UBERON:0000026!2.10e-07!1;UBERON:0008784!2.10e-07!1;UBERON:0006058!2.10e-07!1;UBERON:0003663!2.10e-07!1;UBERON:0001383!2.10e-07!1;UBERON:0004256!2.10e-07!1;UBERON:0002529!2.10e-07!1;UBERON:0004708!2.10e-07!1;UBERON:0002101!2.10e-07!1;UBERON:0004709!2.10e-07!1;UBERON:0003661!2.10e-07!1;UBERON:0002471!2.10e-07!1;UBERON:0004357!2.10e-07!1;UBERON:0009872!2.10e-07!1;UBERON:0004347!2.10e-07!1;UBERON:0005420!2.10e-07!1;UBERON:0005732!2.10e-07!1;UBERON:0006057!2.10e-07!1;UBERON:0000978!2.10e-07!1;UBERON:0002103!2.10e-07!1;UBERON:0001665!2.10e-07!1;UBERON:0003823!2.10e-07!1;UBERON:0000154!2.10e-07!1;UBERON:0005733!2.10e-07!1;UBERON:0005730!2.10e-07!1;UBERON:0001310!9.76e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.97e-34;1!UBERON:0009842;5.97e-34;1!UBERON:0003704;5.97e-34;1!UBERON:0001171;5.97e-34;1!UBERON:0001172;5.97e-34;1!UBERON:0002331;2.78e-30;10!UBERON:0003422;7.58e-23;6!UBERON:0003104;9.48e-20;7!UBERON:0009142;9.48e-20;7!UBERON:0000478;3.94e-13;24!UBERON:0001280;2.74e-12;3!UBERON:0004647;2.74e-12;3!UBERON:0002394;1.50e-09;4!UBERON:0003928;1.50e-09;4!UBERON:0002107;5.63e-08;19!UBERON:0006925;5.63e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.61e-34,1;UBERON:0009842,3.61e-34,1;UBERON:0003704,3.61e-34,1;UBERON:0001171,3.61e-34,1;UBERON:0001172,3.61e-34,1;UBERON:0002331,2.78e-30,10;UBERON:0000358,2.78e-30,10;UBERON:0000307,2.78e-30,10;UBERON:0000091,2.78e-30,10;UBERON:0000087,2.78e-30,10;UBERON:0007010,2.78e-30,10;UBERON:0007806,2.78e-30,10;UBERON:0008780,2.78e-30,10;UBERON:0005728,2.78e-30,10;UBERON:0003422,7.58e-23,6;UBERON:0000478,3.94e-13,24;UBERON:0001280,2.31e-12,3;UBERON:0004647,2.31e-12,3;UBERON:0005171,2.31e-12,3;UBERON:0002107,5.35e-08,19;UBERON:0006925,5.35e-08,19;UBERON:0008836,5.35e-08,19;UBERON:0008835,4.94e-07,22;UBERON:0003894,4.94e-07,22;UBERON:0002394,8.02e-07,6;UBERON:0003928,8.02e-07,6;UBERON:0009854,9.13e-07,23 | |||
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|short_description=p@chr13:110840203..110840210,- | |short_description=p@chr13:110840203..110840210,- | ||
}} | }} |
Latest revision as of 14:30, 24 July 2015
Short description: | p@chr13:110840203..110840210, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110840203..110840210, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 7.58e-23 | 6 |
extraembryonic cell | 6.36e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.61e-34 | 1 |
acinus | 3.61e-34 | 1 |
intrahepatic bile duct | 3.61e-34 | 1 |
portal lobule | 3.61e-34 | 1 |
hepatic acinus | 3.61e-34 | 1 |
umbilical cord | 2.78e-30 | 10 |
blastocyst | 2.78e-30 | 10 |
blastula | 2.78e-30 | 10 |
bilaminar disc | 2.78e-30 | 10 |
inner cell mass | 2.78e-30 | 10 |
cleaving embryo | 2.78e-30 | 10 |
connecting stalk | 2.78e-30 | 10 |
inner cell mass derived epiblast | 2.78e-30 | 10 |
extraembryonic mesoderm | 2.78e-30 | 10 |
mesenchyme of umbilical cord | 7.58e-23 | 6 |
extraembryonic structure | 3.94e-13 | 24 |
liver parenchyma | 2.31e-12 | 3 |
liver lobule | 2.31e-12 | 3 |
hepatic duct | 2.31e-12 | 3 |
liver | 5.35e-08 | 19 |
digestive gland | 5.35e-08 | 19 |
liver bud | 5.35e-08 | 19 |
hepatic diverticulum | 4.94e-07 | 22 |
liver primordium | 4.94e-07 | 22 |
bile duct | 8.02e-07 | 6 |
digestive system duct | 8.02e-07 | 6 |
digestive tract diverticulum | 9.13e-07 | 23 |