FFCP PHASE1:Hg19::chr13:111009846..111009888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111009846..111009888,- | |||
|coexpression_cluster_id=C566 | |coexpression_cluster_id=C566 | ||
|description=CAGE_peak_at_chr13:111009846..111009888,- | |description=CAGE_peak_at_chr13:111009846..111009888,- | ||
|id=chr13:111009846..111009888,- | |id=chr13:111009846..111009888,- | ||
|ontology_enrichment_celltype=CL:0000222!2.41e-18!119;CL:0000055!8.93e-16!180;CL:0000183!1.64e-10!59;CL:0000213!1.14e-09!57;CL:0000215!1.14e-09!57;CL:0000220!2.33e-09!246;CL:0002078!2.93e-09!44;CL:0002321!2.94e-09!248;CL:1000449!5.99e-09!16;CL:0000680!1.43e-08!57;CL:0000056!1.43e-08!57;CL:0000355!1.43e-08!57;CL:0000115!2.37e-08!35;CL:0000187!3.58e-08!54;CL:0000057!1.37e-07!75;CL:1000497!1.96e-07!18;CL:0002518!1.96e-07!18;CL:0002681!2.60e-07!13;CL:0002584!2.60e-07!13;CL:0002139!3.53e-07!24;CL:0000192!5.36e-07!42;CL:0000514!5.36e-07!42;CL:0000393!8.18e-07!60;CL:0000211!8.18e-07!60 | |ontology_enrichment_celltype=CL:0000222!2.41e-18!119;CL:0000055!8.93e-16!180;CL:0000183!1.64e-10!59;CL:0000213!1.14e-09!57;CL:0000215!1.14e-09!57;CL:0000220!2.33e-09!246;CL:0002078!2.93e-09!44;CL:0002321!2.94e-09!248;CL:1000449!5.99e-09!16;CL:0000680!1.43e-08!57;CL:0000056!1.43e-08!57;CL:0000355!1.43e-08!57;CL:0000115!2.37e-08!35;CL:0000187!3.58e-08!54;CL:0000057!1.37e-07!75;CL:1000497!1.96e-07!18;CL:0002518!1.96e-07!18;CL:0002681!2.60e-07!13;CL:0002584!2.60e-07!13;CL:0002139!3.53e-07!24;CL:0000192!5.36e-07!42;CL:0000514!5.36e-07!42;CL:0000393!8.18e-07!60;CL:0000211!8.18e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.49e-10;15!CL:0002681;1.10e-08;12!CL:0002584;1.10e-08;12!CL:0000115;1.50e-08;36!CL:1000497;1.85e-08;17!CL:0002518;1.85e-08;17!CL:0002139;1.17e-07;24!CL:0000136;2.29e-07;13!CL:1000507;5.48e-07;10!CL:1000494;5.48e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.51e-19,121;CL:0000213,5.70e-11,58;CL:0000215,5.70e-11,58;CL:1000449,1.79e-10,15;CL:0000115,4.11e-10,36;CL:0002078,5.06e-10,45;CL:0002681,1.36e-08,12;CL:0002584,1.36e-08,12;CL:1000497,2.14e-08,17;CL:0002518,2.14e-08,17;CL:0000680,4.71e-08,58;CL:0000056,4.71e-08,58;CL:0000355,4.71e-08,58;CL:0002139,1.02e-07,24;CL:0000187,1.32e-07,55;CL:0002321,3.03e-07,250;CL:1000507,6.47e-07,10;CL:1000494,6.47e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;1.49e-10;15!UBERON:0004819;1.49e-10;15!UBERON:0001285;1.49e-10;15!UBERON:0007684;1.49e-10;15!UBERON:0000353;4.97e-09;15!UBERON:0001225;1.10e-08;12!UBERON:0008987;1.10e-08;12!UBERON:0003914;4.71e-08;74!UBERON:0002049;7.94e-08;75!UBERON:0007798;7.94e-08;75!UBERON:0001851;1.68e-07;15!UBERON:0004211;5.48e-07;10!UBERON:0009773;5.48e-07;10!UBERON:0001231;5.48e-07;10!UBERON:0004810;5.48e-07;10!UBERON:0000055;6.35e-07;65 | |||
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|phase1_expression=6.54042165374004,9.42042305120326,8.73917305395021,7.00513088471913,11.1740273606822,10.4680622892044,17.7309914717817,1.26343974685366,23.7678921661853,4.91467873003018,13.2582221914761,2.18441372130172,6.06664049925443,1.11389717664042,1.98838425436749,6.72325146451775,1.80808358407193,2.19093027116212,1.95173119516203,1.72369481307503,4.08001382488506,4.07491137921514,3.14859585844162,3.01123735160345,6.65375989852455,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,3.32442660793179,3.97583067623023,3.00802746381534,2.02785126545153,0,4.37971383272372,1.22895262313288,6.65188192387692,4.65524364173568,1.76821751921912,0.728590576585084,0,0,0,0,0,0,0,0.79504962946682,3.4409383804245,4.16568601929113,2.26123176769604,2.93649605346934,6.87795104850169,1.25396979922086,4.90991842421725,5.33649394030065,5.35552980423472,13.2933674646019,2.28081631715554,30.5077571935212,1.83831540172934,20.253548697044,1.3394959242612,3.59246996201872,2.47745257063309,4.5994991239765,0,6.22885929363385,0,0,2.18047026071267,38.7638122322348,3.92554586160197,1.19168262731897,6.02356903572509,2.12801029319014,4.48542080113846,13.8773694448616,23.6800846480474,1.24484414159907,12.2586711583416,7.84617134944602,8.77873080340602,41.4846665625599,0.937285727335186,0.936480230490962,0.570471821544449,1.34503812496621,0.704606991862589,0.485618833104395,0.140450806702248,0.408308342509787,0.737005903870608,0.723280468230358,2.37600571456411,9.64341024186372,1.82032272387605,12.2165084108761,0.168336113954066,1.25118519871964,0,1.75591048352335,2.45190236639216,6.15976041517047,4.99101605904093,6.09924761342131,2.34913127700424,2.54318281391474,4.50136644126603,0.515262646192195,5.92573242104947,2.41951913231067,5.06328996723799,2.33848812386877,5.80597680761463,2.02509777013059,0.161646056818812,4.61512470271599,0.403008392910561,2.54340888465731,0.966304265816484,2.18196896472668,1.14721838155602,0.121973706129595,0.927708378250397,1.2781333715647,0.829288440122964,0.252320850875628,1.45990943630332,0,0.643240938192885,1.38134921352481,0,0,1.0647612003586,1.01150814046861,0.482022059766964,0.772057809126758,0.871517776369625,0.71181185733329,0.404493924480493,0.196221465125346,0.38474715694639,16.2394200017423,25.2435192846202,8.231480226628,19.1111324801205,0,0,1.77236972004421,0,0,0.857839051492628,0.548751427043128,0,1.00528972411631,0.833296006426766,0.325808305310325,0,7.21656710126366,0.811512834825538,11.9756868120538,21.9437000596832,16.667478452758,31.7724434231779,0,0,0,0,0,0,1.51183915378974,0.992425680696705,1.34337784054272,0.581267877027924,1.91691339582606,0,0,0,0,0,0.253991577168676,2.29193055334967,0,11.9750712215894,2.05654985406647,1.20137223137567,0,3.02753927732474,3.05172048183296,3.0802080044799,8.27338980849778,3.57656445851882,4.22651376278,14.6265964121679,20.8014873822732,1.28603687131071,2.83698264046557,1.8649552531127,12.7250414355751,13.5655401347861,11.5253647149308,4.23457039581856,13.8602860009593,5.543663110534,4.82303003295338,0,9.69738014465953,0,0,0,12.4604924855623,5.7430967917057,1.42636905040718,1.88215698667853,7.19167128926342,1.07436577943937,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,1.47229790062968,1.50051156317903,0.813795071099207,18.0934649531802,14.4527480925701,11.6699787125112,7.9656162195045,2.10662269809403,4.5481500811197,1.03473071292505,5.31380478828349,3.50301420229236,0.695068915744663,25.2583493126935,27.4514739048685,0,0,0,0,1.66435439510497,1.5119514666484,3.96972492510043,3.37616341233737,2.24528075546459,3.97231362692673,3.07024349440022,13.0291676126322,4.45254199334973,0.308419387605311,1.59805552781814,0.410635780069046,3.11552657510173,1.04589340613963,0,3.80962293576241,0.184161977871793,0.68888668898764,4.00600569614778,4.19598127870157,6.31679458070376,7.08541101360616,12.5495963068297,11.6911379722609,8.76078519810868,19.3346752920524,9.86543490603791,25.2621621839503,35.4722681187666,12.7344825645611,24.5827989188878,3.3133915495855,4.15538004464362,8.50724067944278,0,0,1.02580050046556,4.59220503979588,1.30151357865721,1.95777922130672,0,0,0,0.650060246036521,6.42735719376638,0.580024309752732,2.31072925671967,2.76306614507033,1.92971201478343,1.50388342815583,3.0453505721988,2.81247870473133,2.04773681987496,0.661139661443912,4.22818148203234,1.65896526242959,1.2138933702666,0,2.51849877464512,0.6970372701606,1.23213432070436,2.12922412126809,0.869932992075073,3.52116016297448,2.43312307461385,6.32669227911434,6.32758849437452,10.865921053658,2.303080121802,0.855877976067841,1.27281299170375,2.35484592059769,1.43897966066652,4.94166653524899,3.76999687506197,2.02182481573316,7.92551605865041,2.10629228119491,6.33923860816467,3.89941583410055,2.11300293513511,3.54899769660763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| ||
|short_description=p@chr13:111009846..111009888,- | |short_description=p@chr13:111009846..111009888,- | ||
}} | }} |
Latest revision as of 14:31, 24 July 2015
Short description: | p@chr13:111009846..111009888, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111009846..111009888, - |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.51e-19 | 121 |
lining cell | 5.70e-11 | 58 |
barrier cell | 5.70e-11 | 58 |
epithelial cell of nephron | 1.79e-10 | 15 |
endothelial cell | 4.11e-10 | 36 |
meso-epithelial cell | 5.06e-10 | 45 |
kidney cortical cell | 1.36e-08 | 12 |
renal cortical epithelial cell | 1.36e-08 | 12 |
kidney cell | 2.14e-08 | 17 |
kidney epithelial cell | 2.14e-08 | 17 |
muscle precursor cell | 4.71e-08 | 58 |
myoblast | 4.71e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.71e-08 | 58 |
endothelial cell of vascular tree | 1.02e-07 | 24 |
muscle cell | 1.32e-07 | 55 |
embryonic cell | 3.03e-07 | 250 |
kidney tubule cell | 6.47e-07 | 10 |
nephron tubule epithelial cell | 6.47e-07 | 10 |