FFCP PHASE1:Hg19::chr13:20176108..20176126,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:20176108..20176126,+ | |||
|description=CAGE_peak_at_chr13:20176108..20176126,+ | |description=CAGE_peak_at_chr13:20176108..20176126,+ | ||
|id=chr13:20176108..20176126,+ | |id=chr13:20176108..20176126,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.46e-14!254;CL:0000223!2.77e-08!59;CL:0002076!4.08e-08!43 | |ontology_enrichment_celltype=CL:0000066!2.46e-14!254;CL:0000223!2.77e-08!59;CL:0002076!4.08e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.32e-24;7!CL:0000586;2.32e-24;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.32e-24,7;CL:0000586,2.32e-24,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.78e-17;10!UBERON:0005564;3.78e-17;10!UBERON:0009497;6.32e-08;13 | |||
|ontology_enrichment_disease=DOID:14566!1.38e-31!239;DOID:162!8.41e-31!235;DOID:305!8.90e-28!106;DOID:0050687!1.54e-26!143;DOID:0050686!3.48e-11!137;DOID:3095!1.62e-07!22;DOID:2994!1.62e-07!22;DOID:299!3.06e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.09e-12;22!DOID:2994;7.09e-12;22!DOID:2355;1.07e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.32e-12,22;DOID:2994,6.32e-12,22;DOID:2355,1.19e-11,1;DOID:305,1.81e-10,106;DOID:162,3.92e-09,235;DOID:14566,6.81e-09,239;DOID:0050687,7.40e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.85e-10!59;UBERON:0000990!1.85e-10!59;UBERON:0003133!7.57e-09!48;UBERON:0003100!1.58e-07!41;UBERON:0003134!3.01e-07!37;UBERON:0000474!3.01e-07!37;UBERON:0005911!3.45e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.33e-21;8!UBERON:0003135;1.29e-15;11!UBERON:0004913;1.07e-11;1!UBERON:0003703;1.07e-11;1!UBERON:0001174;1.07e-11;1!UBERON:0004914;1.07e-11;1!UBERON:0002394;1.82e-11;4!UBERON:0003928;1.82e-11;4!UBERON:0000991;2.80e-08;21!UBERON:0003101;6.54e-08;22!UBERON:0000079;6.54e-08;22!UBERON:0002423;5.68e-07;25!UBERON:0002294;6.39e-07;7!UBERON:0001173;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.33e-21,8;UBERON:0003135,1.29e-15,11;UBERON:0004913,1.07e-11,1;UBERON:0003703,1.07e-11,1;UBERON:0001174,1.07e-11,1;UBERON:0004914,1.07e-11,1;UBERON:0000991,2.80e-08,21;UBERON:0009196,2.80e-08,21;UBERON:0009117,2.80e-08,21;UBERON:0005564,2.80e-08,21;UBERON:0008835,6.31e-08,22;UBERON:0003894,6.31e-08,22;UBERON:0002394,6.38e-08,6;UBERON:0003928,6.38e-08,6;UBERON:0004176,6.54e-08,22;UBERON:0003101,6.54e-08,22;UBERON:0000079,6.54e-08,22;UBERON:0009854,1.37e-07,23;UBERON:0007499,5.42e-07,25;UBERON:0009497,5.42e-07,25;UBERON:0000015,5.42e-07,25;UBERON:0002423,5.42e-07,25;UBERON:0006235,5.42e-07,25;UBERON:0004161,5.42e-07,25;UBERON:0009856,9.95e-07,26 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.534893840235659,0.57470412614962,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.850650583454319,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,5.38864302868605,0.5745161103971,0.211673582723883,0,0,0,0.313359791546046,0,3.89371088943688,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.99921590399346,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0,0.16480387422676,1.26675244876796,0,0,0.503865495708552,0,0.369254416383208,0,2.06697207638852,0.179021174675609,0,0,0,0,0.969332746095218,0,0,0.520855522170466,0.174919999992391,0,0,0.254253650292766,0.472775363535873,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0.166211681900156,0.225595660617181,0,0,0,0.476809736941136,0,0.652931232636591,0.141353071433941,0.216388639742091,0,0,0,0.889563386041866,0.741383633679017,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,1.20258735531594,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.34823682632161,0.17472666824203,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,1.03082936549324,0,0,0,0.471388069233591,0.407712618220842,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65983798109815,1.57566364614447,0.988990300573997,0.741438982396034,0.295282444544246,1.1007533168552,0,0.136203406111576,0,0,0.415440338029185,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,1.017074150619,0,0.864221491201268,0.653174720218818,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.415045904808692,0,0,0,0.235265819698172,2.34167452903441,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.931577741257556,0,0,0,0.300515217994437,0,0,0.181848659202559,0.966695013382396,0,0,0,0,0,0,0,0.857766365499703,0,0.226705925512272,0,0,0,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.633936370075881,0.19998739585493,0,0,0,0,0,0,0,0.431299245586727,0.629063767423586,0.327628914576042,0.33946505990805,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.294443155503077,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0.118193840883968,0.333694205676207,0,0,0,0.913158720509496,0,0,0,0.632054446930906,0.23248285073625,0,0,0,0,0,0,0,0,0,2.52017555398455,0.31020638566432,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0.596852325484105,0,0.22589216407792,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.655593431782173,0,3.05966489225945,1.06886962106224,3.49200618232411,1.50424523575425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0.732629417498771,0.213454691755431,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.534893840235659,0.57470412614962,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.850650583454319,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,5.38864302868605,0.5745161103971,0.211673582723883,0,0,0,0.313359791546046,0,3.89371088943688,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.99921590399346,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0,0.16480387422676,1.26675244876796,0,0,0.503865495708552,0,0.369254416383208,0,2.06697207638852,0.179021174675609,0,0,0,0,0.969332746095218,0,0,0.520855522170466,0.174919999992391,0,0,0.254253650292766,0.472775363535873,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0.166211681900156,0.225595660617181,0,0,0,0.476809736941136,0,0.652931232636591,0.141353071433941,0.216388639742091,0,0,0,0.889563386041866,0.741383633679017,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,1.20258735531594,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.34823682632161,0.17472666824203,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,1.03082936549324,0,0,0,0.471388069233591,0.407712618220842,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65983798109815,1.57566364614447,0.988990300573997,0.741438982396034,0.295282444544246,1.1007533168552,0,0.136203406111576,0,0,0.415440338029185,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,1.017074150619,0,0.864221491201268,0.653174720218818,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.415045904808692,0,0,0,0.235265819698172,2.34167452903441,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.931577741257556,0,0,0,0.300515217994437,0,0,0.181848659202559,0.966695013382396,0,0,0,0,0,0,0,0.857766365499703,0,0.226705925512272,0,0,0,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.633936370075881,0.19998739585493,0,0,0,0,0,0,0,0.431299245586727,0.629063767423586,0.327628914576042,0.33946505990805,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.294443155503077,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0.118193840883968,0.333694205676207,0,0,0,0.913158720509496,0,0,0,0.632054446930906,0.23248285073625,0,0,0,0,0,0,0,0,0,2.52017555398455,0.31020638566432,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0.596852325484105,0,0.22589216407792,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.655593431782173,0,3.05966489225945,1.06886962106224,3.49200618232411,1.50424523575425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0.732629417498771,0.213454691755431,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:20176108..20176126,+ | |short_description=p@chr13:20176108..20176126,+ | ||
}} | }} |
Latest revision as of 14:56, 24 July 2015
Short description: | p@chr13:20176108..20176126, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:20176108..20176126, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.32e-24 | 7 |
germ cell | 2.32e-24 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.33e-21 | 8 |
male reproductive organ | 1.29e-15 | 11 |
hepatopancreatic ampulla | 1.07e-11 | 1 |
extrahepatic bile duct | 1.07e-11 | 1 |
common bile duct | 1.07e-11 | 1 |
duodenal papilla | 1.07e-11 | 1 |
gonad | 2.80e-08 | 21 |
indifferent external genitalia | 2.80e-08 | 21 |
indifferent gonad | 2.80e-08 | 21 |
gonad primordium | 2.80e-08 | 21 |
hepatic diverticulum | 6.31e-08 | 22 |
liver primordium | 6.31e-08 | 22 |
bile duct | 6.38e-08 | 6 |
digestive system duct | 6.38e-08 | 6 |
external genitalia | 6.54e-08 | 22 |
male organism | 6.54e-08 | 22 |
male reproductive system | 6.54e-08 | 22 |
digestive tract diverticulum | 1.37e-07 | 23 |
epithelial sac | 5.42e-07 | 25 |
epithelium of foregut-midgut junction | 5.42e-07 | 25 |
anatomical boundary | 5.42e-07 | 25 |
hepatobiliary system | 5.42e-07 | 25 |
foregut-midgut junction | 5.42e-07 | 25 |
septum transversum | 5.42e-07 | 25 |
sac | 9.95e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.32e-12 | 22 |
germ cell cancer | 6.32e-12 | 22 |
anemia | 1.19e-11 | 1 |
carcinoma | 1.81e-10 | 106 |
cancer | 3.92e-09 | 235 |
disease of cellular proliferation | 6.81e-09 | 239 |
cell type cancer | 7.40e-09 | 143 |