FFCP PHASE1:Hg19::chr13:23458336..23458347,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:23458336..23458347,+
|short_description=p@chr13:23458336..23458347,+
|description=CAGE_peak_at_chr13:23458336..23458347,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:23458336..23458347,+ | |||
|description=CAGE_peak_at_chr13:23458336..23458347,+ | |||
|id=chr13:23458336..23458347,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.54e-19!5;CL:0002605!1.63e-12!3;CL:0002149!3.90e-11!6;CL:0002255!3.90e-11!6;CL:0000128!4.53e-09!7;CL:0000126!4.53e-09!7;CL:0000127!4.53e-09!7;CL:0002453!4.53e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002149;5.36e-36;6!CL:0002255;5.36e-36;6!CL:0002605;2.12e-18;3!CL:0000313;1.97e-14;1!CL:0000128;1.99e-08;7!CL:0000126;1.99e-08;7!CL:0000127;1.99e-08;7!CL:0000047;4.23e-08;2!CL:0000499;6.01e-08;28!CL:0000159;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.14e-36,6;CL:0002255,6.14e-36,6;CL:0002605,2.53e-18,3;CL:0000313,1.23e-14,1;CL:0000128,2.15e-08,7;CL:0000126,2.15e-08,7;CL:0000127,2.15e-08,7;CL:0002453,2.15e-08,7;CL:0000159,5.74e-08,2;CL:0000499,6.18e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0005795;9.84e-13;10!UBERON:0009117;1.75e-12;10!UBERON:0005564;1.75e-12;10 | |||
|ontology_enrichment_disease=DOID:3001!3.90e-11!6;DOID:4468!5.09e-09!2;DOID:193!1.51e-07!29;DOID:299!5.93e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3001;5.36e-36;6!DOID:299;5.99e-19;25!DOID:120;1.58e-17;27!DOID:193;2.65e-16;29!DOID:2152;1.97e-14;1!DOID:4468;5.01e-08;2!DOID:305;4.11e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,6.14e-36,6;DOID:299,5.45e-19,25;DOID:120,1.44e-17,27;DOID:193,2.44e-16,29;DOID:2152,1.23e-14,1;DOID:305,1.81e-11,106;DOID:0050687,3.41e-08,143;DOID:4468,4.69e-08,2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003134;7.75e-15;33!UBERON:0004911;1.97e-14;1!UBERON:0000474;3.79e-13;37!UBERON:0000995;6.11e-13;17!UBERON:0003975;3.09e-12;18!UBERON:0003133;1.99e-11;44!UBERON:0003100;1.47e-10;41!UBERON:0004175;1.59e-10;21!UBERON:0004909;7.27e-08;2!UBERON:0005156;2.27e-07;59!UBERON:0000990;2.27e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.23e-14,1;UBERON:0003133,4.42e-13,48;UBERON:0003134,9.92e-13,37;UBERON:0000474,9.92e-13,37;UBERON:0003100,1.85e-11,41;UBERON:0005156,1.53e-10,59;UBERON:0000990,1.53e-10,59;UBERON:0000995,1.65e-10,21;UBERON:0005795,4.84e-10,22;UBERON:0003975,4.84e-10,22;UBERON:0004175,7.29e-09,25;UBERON:0004909,5.74e-08,2 | |||
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| ||
|short_description=p@chr13:23458336..23458347,+ | |||
}} | }} |
Latest revision as of 15:06, 24 July 2015
Short description: | p@chr13:23458336..23458347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:23458336..23458347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.14e-36 | 6 |
stromal cell of endometrium | 6.14e-36 | 6 |
astrocyte of the cerebral cortex | 2.53e-18 | 3 |
serous secreting cell | 1.23e-14 | 1 |
oligodendrocyte | 2.15e-08 | 7 |
macroglial cell | 2.15e-08 | 7 |
astrocyte | 2.15e-08 | 7 |
oligodendrocyte precursor cell | 2.15e-08 | 7 |
seromucus secreting cell | 5.74e-08 | 2 |
stromal cell | 6.18e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.23e-14 | 1 |
reproductive organ | 4.42e-13 | 48 |
female reproductive organ | 9.92e-13 | 37 |
female reproductive system | 9.92e-13 | 37 |
female organism | 1.85e-11 | 41 |
reproductive structure | 1.53e-10 | 59 |
reproductive system | 1.53e-10 | 59 |
uterus | 1.65e-10 | 21 |
embryonic uterus | 4.84e-10 | 22 |
internal female genitalia | 4.84e-10 | 22 |
internal genitalia | 7.29e-09 | 25 |
epithelium of gonad | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 6.14e-36 | 6 |
adenocarcinoma | 5.45e-19 | 25 |
female reproductive organ cancer | 1.44e-17 | 27 |
reproductive organ cancer | 2.44e-16 | 29 |
ovary epithelial cancer | 1.23e-14 | 1 |
carcinoma | 1.81e-11 | 106 |
cell type cancer | 3.41e-08 | 143 |
clear cell adenocarcinoma | 4.69e-08 | 2 |