FFCP PHASE1:Hg19::chr13:28552850..28552859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:28552850..28552859,- | |||
|coexpression_cluster_id=C1705 | |||
|description=CAGE_peak_at_chr13:28552850..28552859,- | |description=CAGE_peak_at_chr13:28552850..28552859,- | ||
|id=chr13:28552850..28552859,- | |id=chr13:28552850..28552859,- | ||
|ontology_enrichment_celltype=CL:0002563!1.75e-12!4;CL:0002322!3.59e-10!5;CL:0002253!4.42e-07!2 | |ontology_enrichment_celltype=CL:0002563!1.75e-12!4;CL:0002322!3.59e-10!5;CL:0002253!4.42e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:154!5.28e-07!2;DOID:4236!5.28e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.56e-41!27;UBERON:0000059!2.92e-38!11;UBERON:0001155!1.40e-32!9;UBERON:0005409!1.90e-31!35;UBERON:0004907!9.01e-22!5;UBERON:0001154!5.38e-13!1;UBERON:0001153!5.38e-13!1;UBERON:0001052!8.17e-13!4;UBERON:0001242!1.75e-12!4;UBERON:0001262!1.75e-12!4;UBERON:0004786!1.75e-12!4;UBERON:0004808!1.75e-12!4;UBERON:0001277!1.75e-12!4;UBERON:0004921!1.83e-11!129;UBERON:0004185!1.83e-11!129;UBERON:0003350!3.59e-10!5;UBERON:0001046!3.73e-10!19;UBERON:0001007!2.82e-09!155;UBERON:0001555!2.82e-09!155;UBERON:0007026!2.82e-09!155;UBERON:0004119!2.26e-08!169;UBERON:0000925!2.26e-08!169;UBERON:0006595!2.26e-08!169;UBERON:0002108!1.04e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.51e-59;17!UBERON:0005409;1.78e-46;22!UBERON:0002108;6.08e-40;4!UBERON:0000059;2.32e-32;11!UBERON:0004921;1.18e-26;33!UBERON:0001155;1.40e-22;9!UBERON:0001555;1.79e-10;54!UBERON:0002114;1.46e-08;2!UBERON:0001007;2.14e-08;81!UBERON:0001052;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.30e-59,17;UBERON:0005409,3.69e-41,25;UBERON:0002108,6.50e-40,4;UBERON:0000059,2.06e-32,11;UBERON:0001155,1.26e-22,9;UBERON:0004921,1.22e-11,118;UBERON:0001007,1.94e-09,145;UBERON:0001555,1.94e-09,145;UBERON:0007026,1.94e-09,145;UBERON:0002114,1.51e-08,2;UBERON:0004119,1.57e-08,160;UBERON:0000925,1.57e-08,160;UBERON:0006595,1.57e-08,160;UBERON:0011216,1.33e-07,223;UBERON:0001052,6.50e-07,4 | |||
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|short_description=p@chr13:28552850..28552859,- | |short_description=p@chr13:28552850..28552859,- | ||
}} | }} |
Latest revision as of 15:22, 24 July 2015
Short description: | p@chr13:28552850..28552859, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28552850..28552859, - |
Coexpression cluster: | C1705_rectal_small_colon_temporal_duodenum_hepatoblastoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.30e-59 | 17 |
gastrointestinal system | 3.69e-41 | 25 |
small intestine | 6.50e-40 | 4 |
large intestine | 2.06e-32 | 11 |
colon | 1.26e-22 | 9 |
subdivision of digestive tract | 1.22e-11 | 118 |
digestive system | 1.94e-09 | 145 |
digestive tract | 1.94e-09 | 145 |
primitive gut | 1.94e-09 | 145 |
duodenum | 1.51e-08 | 2 |
endoderm-derived structure | 1.57e-08 | 160 |
endoderm | 1.57e-08 | 160 |
presumptive endoderm | 1.57e-08 | 160 |
organ system subdivision | 1.33e-07 | 223 |
rectum | 6.50e-07 | 4 |