FFCP PHASE1:Hg19::chr13:34197556..34197566,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:34197556..34197566,- | |||
|description=CAGE_peak_at_chr13:34197556..34197566,- | |description=CAGE_peak_at_chr13:34197556..34197566,- | ||
|id=chr13:34197556..34197566,- | |id=chr13:34197556..34197566,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.84e-08;1!UBERON:0000358;2.61e-08;1!UBERON:0004874;6.40e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.67e-33!115;UBERON:0001049!1.14e-15!57;UBERON:0005068!1.14e-15!57;UBERON:0006241!1.14e-15!57;UBERON:0007135!1.14e-15!57;UBERON:0002616!1.02e-14!59;UBERON:0003075!1.39e-13!86;UBERON:0007284!1.39e-13!86;UBERON:0000955!1.45e-13!69;UBERON:0006238!1.45e-13!69;UBERON:0002346!2.11e-12!90;UBERON:0001017!7.84e-12!82;UBERON:0005743!1.17e-11!86;UBERON:0003080!2.74e-11!42;UBERON:0000153!1.05e-10!129;UBERON:0007811!1.05e-10!129;UBERON:0002780!1.62e-10!41;UBERON:0001890!1.62e-10!41;UBERON:0006240!1.62e-10!41;UBERON:0000073!4.96e-10!94;UBERON:0001016!4.96e-10!94;UBERON:0003056!5.08e-10!61;UBERON:0000033!5.42e-10!123;UBERON:0002020!8.00e-09!34;UBERON:0003528!8.00e-09!34;UBERON:0002298!9.88e-09!8;UBERON:0001893!1.08e-08!34;UBERON:0002791!4.51e-08!33;UBERON:0001869!2.40e-07!32;UBERON:0004121!4.67e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.10e-15;4!UBERON:0010133;2.10e-15;4!UBERON:0000007;3.77e-14;2!UBERON:0001894;5.00e-09;7!UBERON:0001736;1.84e-08;1!UBERON:0002146;2.61e-08;1!UBERON:0005623;2.61e-08;1!UBERON:0006834;6.40e-08;1!UBERON:0000989;6.40e-08;1!UBERON:0008811;6.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.53e-15,4;UBERON:0010133,1.53e-15,4;UBERON:0000007,3.78e-14,2;UBERON:0001894,4.18e-09,7;UBERON:0006222,4.18e-09,7;UBERON:0001736,1.91e-08,1;UBERON:0006298,1.91e-08,1;UBERON:0002146,2.35e-08,1;UBERON:0005623,2.35e-08,1;UBERON:0000989,3.58e-08,1;UBERON:0008811,3.58e-08,1;UBERON:0006258,3.58e-08,1;UBERON:0005876,3.58e-08,1;UBERON:0004874,3.58e-08,1;UBERON:0006834,6.19e-08,1;UBERON:0007023,2.03e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0.183138929636687,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,1.4098700508785,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0.222617410045812,0,0,1.19548792950642,0,0.251932747854276,1.84083628503879,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0,0.724999575434793,0,0,0,1.37897349296586,0.583209226766509,0,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0.216388639742091,1.99052386215701,0.442287822516696,0.611030144933625,0,0.123563938946503,0,0.471807930864739,0.802577647298789,0,0.182454789215666,0,0,0.789168805698781,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0.39961921916426,0,0,1.02956998717179,0.14405479798815,0,0,0,0,0.509991088181609,0,1.20084057741958,0.547621515567972,0,0.429765441419957,0.525774708558629,0.279282401272254,2.7499250881402,0,0.798716001995964,0.429226048136571,0,0.671834724867263,0,0,0.945398187686684,0.329663433524666,0.539228350833479,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0.335434687599266,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.339936274560377,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0.638341257770182,0.544017803369474,0.7520696820681,0,0.327872630709804,0,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.310482014706917,0,0,2.88133323329131,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0.245772908753719,0,0.59996218756479,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.157723490002507,0,0,0.6124909547064,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0.550285795565037,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,0,0.548257766857182,1.98484471355718,0,0.127762427639595,0,1.68141861109412,1.21393120847326,1.36597314810779,0.709618961301111,0,0.171488009437418,0.203909198930495,0.263091094251396,0,0,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0.9555033757741,1.1436247068265,0.158013611732727,1.3948971044175,0.521574816907738,0,0.207216164163037,0,0,3.01159151174194,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,2.3196288626764,0,0,0,0,0,0.219881033490858,0.150962843566674,0.463044948647668,0,2.35158648180761,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0,0,3.21110498383179,0.573358332605805,0,0.0679914901909147,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.151557396436479,1.07185652062471,0,0.413731983447581,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0.808468755832877,0,0.684466602170562,0.134704106029175,0.430333232356058,1.66330178273007,0,0,0,0,2.34640942403454,1.34465588601153,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0.183138929636687,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,1.4098700508785,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0,0.222617410045812,0,0,1.19548792950642,0,0.251932747854276,1.84083628503879,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0,0.724999575434793,0,0,0,1.37897349296586,0.583209226766509,0,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0.216388639742091,1.99052386215701,0.442287822516696,0.611030144933625,0,0.123563938946503,0,0.471807930864739,0.802577647298789,0,0.182454789215666,0,0,0.789168805698781,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0.39961921916426,0,0,1.02956998717179,0.14405479798815,0,0,0,0,0.509991088181609,0,1.20084057741958,0.547621515567972,0,0.429765441419957,0.525774708558629,0.279282401272254,2.7499250881402,0,0.798716001995964,0.429226048136571,0,0.671834724867263,0,0,0.945398187686684,0.329663433524666,0.539228350833479,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0.335434687599266,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.339936274560377,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0.638341257770182,0.544017803369474,0.7520696820681,0,0.327872630709804,0,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.310482014706917,0,0,2.88133323329131,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0.245772908753719,0,0.59996218756479,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.157723490002507,0,0,0.6124909547064,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0.550285795565037,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,0,0.548257766857182,1.98484471355718,0,0.127762427639595,0,1.68141861109412,1.21393120847326,1.36597314810779,0.709618961301111,0,0.171488009437418,0.203909198930495,0.263091094251396,0,0,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0.9555033757741,1.1436247068265,0.158013611732727,1.3948971044175,0.521574816907738,0,0.207216164163037,0,0,3.01159151174194,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,2.3196288626764,0,0,0,0,0,0.219881033490858,0.150962843566674,0.463044948647668,0,2.35158648180761,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0,0,3.21110498383179,0.573358332605805,0,0.0679914901909147,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.151557396436479,1.07185652062471,0,0.413731983447581,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0.808468755832877,0,0.684466602170562,0.134704106029175,0.430333232356058,1.66330178273007,0,0,0,0,2.34640942403454,1.34465588601153,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr13:34197556..34197566,- | |short_description=p@chr13:34197556..34197566,- | ||
}} | }} |
Latest revision as of 15:44, 24 July 2015
Short description: | p@chr13:34197556..34197566, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:34197556..34197566, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.53e-15 | 4 |
neuroendocrine gland | 1.53e-15 | 4 |
pituitary gland | 3.78e-14 | 2 |
diencephalon | 4.18e-09 | 7 |
future diencephalon | 4.18e-09 | 7 |
submandibular gland | 1.91e-08 | 1 |
submandibular gland primordium | 1.91e-08 | 1 |
pulmonary valve | 2.35e-08 | 1 |
semi-lunar valve | 2.35e-08 | 1 |
penis | 3.58e-08 | 1 |
intromittent organ | 3.58e-08 | 1 |
lateral plate mesenchyme | 3.58e-08 | 1 |
undifferentiated genital tubercle | 3.58e-08 | 1 |
somatopleure | 3.58e-08 | 1 |
uterus or analog | 6.19e-08 | 1 |
adult organism | 2.03e-07 | 114 |