FFCP PHASE1:Hg19::chr13:41333181..41333199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:41333181..41333199,- | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_at_chr13:41333181..41333199,- | |description=CAGE_peak_at_chr13:41333181..41333199,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.00e-13!24;CL:0000826!1.00e-13!24;CL:0000838!1.08e-09!52;CL:0000542!2.03e-09!53;CL:0000051!2.03e-09!53 | |ontology_enrichment_celltype=CL:0000945!1.00e-13!24;CL:0000826!1.00e-13!24;CL:0000838!1.08e-09!52;CL:0000542!2.03e-09!53;CL:0000051!2.03e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.75e-12;24 | |ontology_enrichment_celltype_v019=CL:0000945;3.75e-12;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060058!5.98e-08!10 | |ontology_enrichment_disease=DOID:0060058!5.98e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.08e-27;10 | |ontology_enrichment_disease_v019=DOID:0060058;2.08e-27;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.08e-27,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.52e-07!7 | |ontology_enrichment_uberon=UBERON:0004177!9.52e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;4.66e-66;1!UBERON:0000026;4.66e-66;1!UBERON:0008784;4.66e-66;1!UBERON:0006058;4.66e-66;1!UBERON:0003663;4.66e-66;1!UBERON:0004256;4.66e-66;1!UBERON:0004708;4.66e-66;1!UBERON:0002101;4.66e-66;1!UBERON:0004709;4.66e-66;1!UBERON:0002529;4.66e-66;1!UBERON:0010538;4.66e-66;1!UBERON:0003661;4.66e-66;1!UBERON:0010890;4.66e-66;1!UBERON:0002471;4.66e-66;1!UBERON:0001383;4.66e-66;1!UBERON:0010758;4.66e-66;1!UBERON:0010707;4.66e-66;1!UBERON:0000978;4.66e-66;1!UBERON:0002103;4.66e-66;1!UBERON:0001665;4.66e-66;1!UBERON:0003823;4.66e-66;1!UBERON:0000154;4.66e-66;1!UBERON:0010709;4.66e-66;1!UBERON:0005090;7.05e-34;2!UBERON:0001630;7.05e-34;2 | |ontology_enrichment_uberon_v019=UBERON:0001389;4.66e-66;1!UBERON:0000026;4.66e-66;1!UBERON:0008784;4.66e-66;1!UBERON:0006058;4.66e-66;1!UBERON:0003663;4.66e-66;1!UBERON:0004256;4.66e-66;1!UBERON:0004708;4.66e-66;1!UBERON:0002101;4.66e-66;1!UBERON:0004709;4.66e-66;1!UBERON:0002529;4.66e-66;1!UBERON:0010538;4.66e-66;1!UBERON:0003661;4.66e-66;1!UBERON:0010890;4.66e-66;1!UBERON:0002471;4.66e-66;1!UBERON:0001383;4.66e-66;1!UBERON:0010758;4.66e-66;1!UBERON:0010707;4.66e-66;1!UBERON:0000978;4.66e-66;1!UBERON:0002103;4.66e-66;1!UBERON:0001665;4.66e-66;1!UBERON:0003823;4.66e-66;1!UBERON:0000154;4.66e-66;1!UBERON:0010709;4.66e-66;1!UBERON:0005090;7.05e-34;2!UBERON:0001630;7.05e-34;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.66e-66,1;UBERON:0001389,4.66e-66,1;UBERON:0000026,4.66e-66,1;UBERON:0008784,4.66e-66,1;UBERON:0006058,4.66e-66,1;UBERON:0003663,4.66e-66,1;UBERON:0004256,4.66e-66,1;UBERON:0004708,4.66e-66,1;UBERON:0002101,4.66e-66,1;UBERON:0004709,4.66e-66,1;UBERON:0002529,4.66e-66,1;UBERON:0010538,4.66e-66,1;UBERON:0003661,4.66e-66,1;UBERON:0010890,4.66e-66,1;UBERON:0002471,4.66e-66,1;UBERON:0001383,4.66e-66,1;UBERON:0004357,4.66e-66,1;UBERON:0004347,4.66e-66,1;UBERON:0005420,4.66e-66,1;UBERON:0005732,4.66e-66,1;UBERON:0010758,4.66e-66,1;UBERON:0010707,4.66e-66,1;UBERON:0000978,4.66e-66,1;UBERON:0002103,4.66e-66,1;UBERON:0001665,4.66e-66,1;UBERON:0003823,4.66e-66,1;UBERON:0000154,4.66e-66,1;UBERON:0010709,4.66e-66,1;UBERON:0005733,4.66e-66,1;UBERON:0005730,4.66e-66,1;UBERON:0005090,7.05e-34,2;UBERON:0001630,7.05e-34,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,8.05658886035137,7.2506308568585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0,0,0,0.547364367646998,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.375935671919414,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0.5388164241167,0.430333232356058,0,0,0,0,0,0,0,0,0,0.402547587182052,0 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| ||
|short_description=p@chr13:41333181..41333199,- | |short_description=p@chr13:41333181..41333199,- | ||
}} | }} |
Latest revision as of 15:58, 24 July 2015
Short description: | p@chr13:41333181..41333199, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:41333181..41333199, - |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.66e-66 | 1 |
soleus muscle | 4.66e-66 | 1 |
appendage | 4.66e-66 | 1 |
lower limb segment | 4.66e-66 | 1 |
multi-limb segment region | 4.66e-66 | 1 |
hindlimb muscle | 4.66e-66 | 1 |
hindlimb zeugopod muscle | 4.66e-66 | 1 |
paired limb/fin | 4.66e-66 | 1 |
limb | 4.66e-66 | 1 |
pelvic appendage | 4.66e-66 | 1 |
limb segment | 4.66e-66 | 1 |
paired limb/fin segment | 4.66e-66 | 1 |
limb muscle | 4.66e-66 | 1 |
pelvic complex muscle | 4.66e-66 | 1 |
zeugopod | 4.66e-66 | 1 |
muscle of leg | 4.66e-66 | 1 |
paired limb/fin bud | 4.66e-66 | 1 |
limb bud | 4.66e-66 | 1 |
pelvic appendage bud | 4.66e-66 | 1 |
limb/fin field | 4.66e-66 | 1 |
subdivision of organism along appendicular axis | 4.66e-66 | 1 |
appendage girdle complex | 4.66e-66 | 1 |
leg | 4.66e-66 | 1 |
hindlimb | 4.66e-66 | 1 |
triceps surae | 4.66e-66 | 1 |
hindlimb zeugopod | 4.66e-66 | 1 |
posterior region of body | 4.66e-66 | 1 |
pelvic complex | 4.66e-66 | 1 |
limb field | 4.66e-66 | 1 |
hindlimb/pelvic fin field | 4.66e-66 | 1 |
muscle structure | 7.05e-34 | 2 |
muscle organ | 7.05e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.08e-27 | 10 |