FFCP PHASE1:Hg19::chr13:87732242..87732246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:87732242..87732246,- | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_at_chr13:87732242..87732246,- | |description=CAGE_peak_at_chr13:87732242..87732246,- | ||
|id=chr13:87732242..87732246,- | |id=chr13:87732242..87732246,- | ||
|ontology_enrichment_celltype=CL:0002573!2.18e-38!2;CL:0000319!1.33e-29!1;CL:1000415!1.15e-15!2;CL:0000054!1.33e-15!2;CL:0000137!1.33e-15!2;CL:0000092!1.33e-15!2;CL:0000159!1.54e-15!2;CL:0000243!1.25e-07!15;CL:0000125!1.25e-07!15;CL:0000030!1.25e-07!15;CL:0000339!1.25e-07!15;CL:0000095!6.38e-07!17;CL:0000123!6.38e-07!17 | |ontology_enrichment_celltype=CL:0002573!2.18e-38!2;CL:0000319!1.33e-29!1;CL:1000415!1.15e-15!2;CL:0000054!1.33e-15!2;CL:0000137!1.33e-15!2;CL:0000092!1.33e-15!2;CL:0000159!1.54e-15!2;CL:0000243!1.25e-07!15;CL:0000125!1.25e-07!15;CL:0000030!1.25e-07!15;CL:0000339!1.25e-07!15;CL:0000095!6.38e-07!17;CL:0000123!6.38e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002573;6.39e-53;2!CL:0000319;1.48e-40;1!CL:1000415;3.11e-21;2!CL:0000054;3.81e-21;2!CL:0000137;3.81e-21;2!CL:0000092;3.81e-21;2!CL:0000159;4.66e-21;2!CL:0000243;2.70e-10;15!CL:0000125;2.70e-10;15!CL:0000095;2.56e-09;17!CL:0002319;7.67e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,6.39e-53,2;CL:0000319,1.48e-40,1;CL:1000415,3.11e-21,2;CL:0000054,3.81e-21,2;CL:0000137,3.81e-21,2;CL:0000092,3.81e-21,2;CL:0000159,4.66e-21,2;CL:0000243,2.70e-10,15;CL:0000125,2.70e-10,15;CL:0000030,2.70e-10,15;CL:0000339,2.70e-10,15;CL:0000095,2.56e-09,17;CL:0000123,2.56e-09,17;CL:0002319,7.67e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000339;2.70e-10;15 | |||
|ontology_enrichment_disease=DOID:0060085!9.99e-30!1;DOID:3165!9.99e-30!1;DOID:0060121!9.99e-30!1;DOID:2438!9.99e-30!1;DOID:4418!9.99e-30!1;DOID:3030!1.33e-29!1;DOID:200!1.33e-15!2;DOID:4305!1.33e-15!2;DOID:0060072!1.82e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:0060085;9.91e-41;1!DOID:3165;9.91e-41;1!DOID:0060121;9.91e-41;1!DOID:2438;9.91e-41;1!DOID:4418;9.91e-41;1!DOID:3030;1.48e-40;1!DOID:200;3.81e-21;2!DOID:4305;3.81e-21;2!DOID:0060072;2.80e-11;4!DOID:201;5.92e-08;6!DOID:0060100;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.91e-41,1;DOID:3165,9.91e-41,1;DOID:0060121,9.91e-41,1;DOID:2438,9.91e-41,1;DOID:4418,9.91e-41,1;DOID:3030,1.48e-40,1;DOID:200,3.81e-21,2;DOID:4305,3.81e-21,2;DOID:0060072,2.80e-11,4;DOID:201,5.92e-08,6;DOID:0060100,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000010!1.49e-13!8;UBERON:0002110!6.73e-11!3;UBERON:0006242!6.73e-11!3;UBERON:0002369!1.09e-10!3;UBERON:0001235!1.09e-10!3;UBERON:0006858!1.09e-10!3;UBERON:0000014!1.82e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;1.76e-18;8!UBERON:0002110;1.22e-14;3!UBERON:0000014;2.80e-11;4!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.76e-18,8;UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0000014,2.80e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37814839895082,0,0,16.2722405110613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21195617878347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06498800657509,1.95990830946063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37814839895082,0,0,16.2722405110613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21195617878347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06498800657509,1.95990830946063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:87732242..87732246,- | |short_description=p@chr13:87732242..87732246,- | ||
}} | }} |
Latest revision as of 17:24, 24 July 2015
Short description: | p@chr13:87732242..87732246, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:87732242..87732246, - |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 6.39e-53 | 2 |
mucus secreting cell | 1.48e-40 | 1 |
epithelial cell of gall bladder | 3.11e-21 | 2 |
bone matrix secreting cell | 3.81e-21 | 2 |
osteocyte | 3.81e-21 | 2 |
osteoclast | 3.81e-21 | 2 |
seromucus secreting cell | 4.66e-21 | 2 |
glial cell (sensu Vertebrata) | 2.70e-10 | 15 |
glial cell | 2.70e-10 | 15 |
glioblast | 2.70e-10 | 15 |
glioblast (sensu Vertebrata) | 2.70e-10 | 15 |
neuron associated cell | 2.56e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.56e-09 | 17 |
neural cell | 7.67e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.76e-18 | 8 |
gallbladder | 1.22e-14 | 3 |
gall bladder primordium | 1.22e-14 | 3 |
zone of skin | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.91e-41 | 1 |
skin benign neoplasm | 9.91e-41 | 1 |
integumentary system benign neoplasm | 9.91e-41 | 1 |
dermis tumor | 9.91e-41 | 1 |
cutaneous fibrous histiocytoma | 9.91e-41 | 1 |
mucinous adenocarcinoma | 1.48e-40 | 1 |
giant cell tumor | 3.81e-21 | 2 |
bone giant cell tumor | 3.81e-21 | 2 |
benign neoplasm | 2.80e-11 | 4 |
connective tissue cancer | 5.92e-08 | 6 |
musculoskeletal system cancer | 5.92e-08 | 6 |