FFCP PHASE1:Hg19::chr13:92756378..92756395,+: Difference between revisions
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|id=chr13:92756378..92756395,+
|short_description=p@chr13:92756378..92756395,+
|description=CAGE_peak_at_chr13:92756378..92756395,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:92756378..92756395,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr13:92756378..92756395,+ | |||
|id=chr13:92756378..92756395,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.61e-12!4;CL:0000319!3.08e-12!1;CL:0000136!3.66e-07!15;CL:0002253!6.42e-07!2;CL:0000159!9.54e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.11e-25;4!CL:0002253;1.29e-13;2!CL:0002231;1.01e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.11e-25,4;CL:0002253,1.37e-13,2;CL:0002231,1.01e-09,3;CL:0000223,2.72e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.43e-08;31 | |||
|ontology_enrichment_disease=DOID:178!1.25e-12!1;DOID:326!1.25e-12!1;DOID:3978!1.25e-12!1;DOID:3394!1.25e-12!1;DOID:5844!1.25e-12!1;DOID:3030!3.08e-12!1;DOID:114!6.07e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:178;8.64e-26;1!DOID:326;8.64e-26;1!DOID:3978;8.64e-26;1!DOID:3394;8.64e-26;1!DOID:5844;8.64e-26;1!DOID:114;1.29e-13;2!DOID:1287;1.86e-07;4!DOID:5409;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,7.62e-26,1;DOID:326,7.62e-26,1;DOID:3978,7.62e-26,1;DOID:3394,7.62e-26,1;DOID:5844,7.62e-26,1;DOID:114,1.21e-13,2;DOID:1287,1.80e-07,4;DOID:5409,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001242!2.61e-12!4;UBERON:0001262!2.61e-12!4;UBERON:0004786!2.61e-12!4;UBERON:0004808!2.61e-12!4;UBERON:0001277!2.61e-12!4;UBERON:0003350!4.98e-10!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.11e-25;4!UBERON:0001262;1.11e-25;4!UBERON:0004786;1.11e-25;4!UBERON:0004808;1.11e-25;4!UBERON:0001277;1.11e-25;4!UBERON:0000485;3.79e-15;7!UBERON:0003929;3.79e-15;7!UBERON:0003350;2.20e-13;8!UBERON:0001052;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.11e-25,4;UBERON:0001262,1.11e-25,4;UBERON:0004786,1.11e-25,4;UBERON:0004808,1.11e-25,4;UBERON:0001277,1.11e-25,4;UBERON:0003350,2.20e-13,8;UBERON:0000485,5.22e-12,9;UBERON:0003929,8.31e-08,54;UBERON:0005911,8.56e-08,82;UBERON:0001052,1.92e-07,4 | |||
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|short_description=p@chr13:92756378..92756395,+ | |||
}} | }} |
Latest revision as of 17:27, 24 July 2015
Short description: | p@chr13:92756378..92756395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:92756378..92756395, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.11e-25 | 4 |
epithelial cell of large intestine | 1.37e-13 | 2 |
epithelial cell of prostate | 1.01e-09 | 3 |
endodermal cell | 2.72e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.11e-25 | 4 |
wall of intestine | 1.11e-25 | 4 |
gastrointestinal system mucosa | 1.11e-25 | 4 |
gastrointestinal system epithelium | 1.11e-25 | 4 |
intestinal epithelium | 1.11e-25 | 4 |
epithelium of mucosa | 2.20e-13 | 8 |
simple columnar epithelium | 5.22e-12 | 9 |
gut epithelium | 8.31e-08 | 54 |
endo-epithelium | 8.56e-08 | 82 |
rectum | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.62e-26 | 1 |
ischemia | 7.62e-26 | 1 |
extrinsic cardiomyopathy | 7.62e-26 | 1 |
myocardial ischemia | 7.62e-26 | 1 |
myocardial infarction | 7.62e-26 | 1 |
heart disease | 1.21e-13 | 2 |
cardiovascular system disease | 1.80e-07 | 4 |
lung small cell carcinoma | 2.04e-07 | 4 |