FFCP PHASE1:Hg19::chr14:22953440..22953456,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:22953440..22953456,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr14:22953440..22953456,- | |||
|id=chr14:22953440..22953456,- | |||
|ontology_enrichment_celltype=CL:0000542!8.22e-45!53;CL:0000051!8.22e-45!53;CL:0000838!5.87e-43!52;CL:0000738!2.07e-25!140;CL:0002087!3.96e-23!119;CL:0000791!3.03e-22!18;CL:0000789!3.03e-22!18;CL:0002420!3.03e-22!18;CL:0002419!3.03e-22!18;CL:0000790!3.03e-22!18;CL:0000945!7.53e-22!24;CL:0000826!7.53e-22!24;CL:0000037!5.67e-19!172;CL:0000566!5.67e-19!172;CL:0002031!3.82e-18!124;CL:0002032!1.57e-17!165;CL:0000837!1.57e-17!165;CL:0000084!3.48e-17!25;CL:0000827!3.48e-17!25;CL:0000988!3.94e-17!182;CL:0000236!4.17e-13!14;CL:0000625!3.15e-11!11;CL:0000624!4.14e-11!6;CL:0000623!3.74e-07!3;CL:0000825!3.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.55e-23;24!CL:0000542;3.34e-17;53!CL:0000623;2.49e-10;3!CL:0002127;8.77e-09;1!CL:0000911;8.77e-09;1!CL:0000814;8.77e-09;1!CL:0000946;2.29e-08;1!CL:0000786;2.29e-08;1!CL:0000084;4.79e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.60e-36,53;CL:0000051,3.60e-36,53;CL:0000838,1.71e-32,52;CL:0000945,2.27e-23,24;CL:0000826,2.27e-23,24;CL:0002087,9.41e-15,115;CL:0002031,3.28e-12,120;CL:0000738,5.48e-12,136;CL:0000623,3.16e-10,3;CL:0000825,3.16e-10,3;CL:0002032,1.24e-09,161;CL:0000837,1.24e-09,161;CL:0000037,4.26e-09,168;CL:0002127,8.78e-09,1;CL:0000914,8.78e-09,1;CL:0000911,8.78e-09,1;CL:0000814,8.78e-09,1;CL:0002042,8.78e-09,1;CL:0002039,8.78e-09,1;CL:0002040,8.78e-09,1;CL:0002041,8.78e-09,1;CL:0000946,1.48e-08,1;CL:0000786,1.48e-08,1;CL:0000980,1.48e-08,1;CL:0000988,1.79e-08,177;CL:0000236,2.34e-08,14;CL:0000084,4.85e-07,25;CL:0000827,4.85e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;3.34e-17;53!UBERON:0001045;2.29e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;7.55e-09;1!DOID:0050177;7.55e-09;1!DOID:0050427;7.55e-09;1!DOID:12603;8.77e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.56e-09,1;DOID:0050177,7.56e-09,1;DOID:0050427,7.56e-09,1;DOID:12603,9.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.56e-11!15;UBERON:0000179!1.56e-11!15;UBERON:0000463!1.56e-11!15;UBERON:0004177!1.02e-10!7;UBERON:0002370!4.34e-09!4;UBERON:0005058!4.34e-09!4;UBERON:0009113!4.34e-09!4;UBERON:0003295!4.34e-09!4;UBERON:0005562!4.34e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.29e-08;1!UBERON:0001154;2.29e-08;1!UBERON:0001153;2.29e-08;1!UBERON:0009854;2.29e-08;1!UBERON:0001961;2.29e-08;1!UBERON:0001744;2.29e-08;1!UBERON:0001042;2.29e-08;1!UBERON:0001735;2.29e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.05e-09,7;UBERON:0005057,1.05e-09,7;UBERON:0001154,1.71e-08,1;UBERON:0001153,1.71e-08,1;UBERON:0001045,1.71e-08,1;UBERON:0002372,2.84e-08,1;UBERON:0001961,2.84e-08,1;UBERON:0001744,2.84e-08,1;UBERON:0001735,2.84e-08,1;UBERON:0002370,4.54e-08,4;UBERON:0005058,4.54e-08,4;UBERON:0009113,4.54e-08,4;UBERON:0003295,4.54e-08,4;UBERON:0005562,4.54e-08,4;UBERON:0001042,6.75e-07,10;UBERON:0009145,6.75e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6616528807584,23.4807685826845,25.5810039269458,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0.284338464974843,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,1.28019066769952,0.800791974072025,1.72425731986345,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0,0.590129310341499,0.393010762749165,0.411202997999018,1.00311897234407,0.651844533267181,0.473447805734733,1.94826728407911,0.445641827540694,0.294605907474837,0.664601683750863,0.541607727530031,0.768547918354051,0.390178042679635,0.493313713811028,0.276350017785848,0,0.741432815810302,1.33770414044857,3.1360657141493,0.113309342697566,0.766440987203842,0.68725489096526,0.506039384039006,2.22995790026868,0,0.950452044448374,0.752875595388864,0.76791966692651,2.49861453104692,0.710331756132051,1.64225599384209,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04383147970873,1.37921532141349,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.952927101831156,0.822724546172388,1.29694662238543,0,0.79312517629427,0,0,0,5.01668572839441,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,1.22587722705226,0,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0.398495976502139,1.65770349318689,0,0,0.861593638227486,0,0,0,0,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0.992332043623902,0,5.60245952552121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.563903507879121,1.35361564744512,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.710478008196067,1.11734485732544,0,0.0636471582781649,0,0,0,1.27968900727716,0.430333232356058,0,0,0,0,0,0,0.122241444182866,0,0,0,6.41136984606466 | |||
|short_description=p@chr14:22953440..22953456,- | |||
}} |
Latest revision as of 19:13, 24 July 2015
Short description: | p@chr14:22953440..22953456, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:22953440..22953456, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.60e-36 | 53 |
common lymphoid progenitor | 3.60e-36 | 53 |
lymphoid lineage restricted progenitor cell | 1.71e-32 | 52 |
lymphocyte of B lineage | 2.27e-23 | 24 |
pro-B cell | 2.27e-23 | 24 |
nongranular leukocyte | 9.41e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 3.28e-12 | 120 |
leukocyte | 5.48e-12 | 136 |
natural killer cell | 3.16e-10 | 3 |
pro-NK cell | 3.16e-10 | 3 |
hematopoietic oligopotent progenitor cell | 1.24e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-09 | 161 |
hematopoietic stem cell | 4.26e-09 | 168 |
innate effector T cell | 8.78e-09 | 1 |
immature NK T cell | 8.78e-09 | 1 |
effector T cell | 8.78e-09 | 1 |
mature NK T cell | 8.78e-09 | 1 |
immature NK T cell stage IV | 8.78e-09 | 1 |
immature NK T cell stage I | 8.78e-09 | 1 |
immature NK T cell stage II | 8.78e-09 | 1 |
immature NK T cell stage III | 8.78e-09 | 1 |
antibody secreting cell | 1.48e-08 | 1 |
plasma cell | 1.48e-08 | 1 |
plasmablast | 1.48e-08 | 1 |
hematopoietic cell | 1.79e-08 | 177 |
B cell | 2.34e-08 | 14 |
T cell | 4.85e-07 | 25 |
pro-T cell | 4.85e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.05e-09 | 7 |
immune organ | 1.05e-09 | 7 |
vermiform appendix | 1.71e-08 | 1 |
caecum | 1.71e-08 | 1 |
midgut | 1.71e-08 | 1 |
tonsil | 2.84e-08 | 1 |
mucosa-associated lymphoid tissue | 2.84e-08 | 1 |
lymphoid tissue | 2.84e-08 | 1 |
tonsillar ring | 2.84e-08 | 1 |
thymus | 4.54e-08 | 4 |
hemolymphoid system gland | 4.54e-08 | 4 |
thymic region | 4.54e-08 | 4 |
pharyngeal gland | 4.54e-08 | 4 |
thymus primordium | 4.54e-08 | 4 |
chordate pharynx | 6.75e-07 | 10 |
pharyngeal region of foregut | 6.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.56e-09 | 1 |
monogenic disease | 7.56e-09 | 1 |
xeroderma pigmentosum | 7.56e-09 | 1 |
acute leukemia | 9.46e-09 | 1 |