FFCP PHASE1:Hg19::chr14:73570051..73570166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:73570051..73570166,+ | |||
|coexpression_cluster_id=C1037 | |coexpression_cluster_id=C1037 | ||
|description=CAGE_peak_at_chr14:73570051..73570166,+ | |description=CAGE_peak_at_chr14:73570051..73570166,+ | ||
|id=chr14:73570051..73570166,+ | |id=chr14:73570051..73570166,+ | ||
|ontology_enrichment_celltype=CL:0002032!9.68e-08!165;CL:0000837!9.68e-08!165;CL:0000037!9.45e-07!172;CL:0000566!9.45e-07!172 | |ontology_enrichment_celltype=CL:0002032!9.68e-08!165;CL:0000837!9.68e-08!165;CL:0000037!9.45e-07!172;CL:0000566!9.45e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-07;33!CL:0002057;1.89e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.03e-07,161;CL:0000837,4.03e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.03e-27!235;DOID:14566!2.44e-26!239;DOID:0050687!7.90e-14!143;DOID:0050686!5.65e-13!137;DOID:2531!1.73e-11!51;DOID:0060083!1.73e-11!51;DOID:305!1.07e-10!106;DOID:1240!4.65e-10!39;DOID:8692!2.01e-07!31 | |ontology_enrichment_disease=DOID:162!6.03e-27!235;DOID:14566!2.44e-26!239;DOID:0050687!7.90e-14!143;DOID:0050686!5.65e-13!137;DOID:2531!1.73e-11!51;DOID:0060083!1.73e-11!51;DOID:305!1.07e-10!106;DOID:1240!4.65e-10!39;DOID:8692!2.01e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.40e-08;39!DOID:2531;1.17e-07;51!DOID:0060083;1.17e-07;51!DOID:8692;2.38e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.15e-26,235;DOID:14566,4.59e-26,239;DOID:0050687,1.24e-13,143;DOID:0050686,8.43e-13,137;DOID:2531,1.59e-11,51;DOID:0060083,1.59e-11,51;DOID:305,1.49e-10,106;DOID:1240,4.32e-10,39;DOID:8692,1.91e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-08!57;UBERON:0005068!2.79e-08!57;UBERON:0006241!2.79e-08!57;UBERON:0007135!2.79e-08!57;UBERON:0002780!5.70e-08!41;UBERON:0001890!5.70e-08!41;UBERON:0006240!5.70e-08!41;UBERON:0001017!1.18e-07!82;UBERON:0003080!2.95e-07!42;UBERON:0002020!3.05e-07!34;UBERON:0003528!3.05e-07!34;UBERON:0000073!6.73e-07!94;UBERON:0001016!6.73e-07!94 | |ontology_enrichment_uberon=UBERON:0001049!2.79e-08!57;UBERON:0005068!2.79e-08!57;UBERON:0006241!2.79e-08!57;UBERON:0007135!2.79e-08!57;UBERON:0002780!5.70e-08!41;UBERON:0001890!5.70e-08!41;UBERON:0006240!5.70e-08!41;UBERON:0001017!1.18e-07!82;UBERON:0003080!2.95e-07!42;UBERON:0002020!3.05e-07!34;UBERON:0003528!3.05e-07!34;UBERON:0000073!6.73e-07!94;UBERON:0001016!6.73e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.35e-07;34!UBERON:0002020;8.35e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.10e-09,56;UBERON:0005068,9.10e-09,56;UBERON:0006241,9.10e-09,56;UBERON:0007135,9.10e-09,56;UBERON:0001016,5.04e-08,89;UBERON:0000073,5.35e-08,53;UBERON:0002616,5.35e-08,53;UBERON:0002780,5.39e-08,41;UBERON:0001890,5.39e-08,41;UBERON:0003080,5.39e-08,41;UBERON:0006240,5.39e-08,41;UBERON:0001017,6.04e-08,81;UBERON:0003528,2.91e-07,34;UBERON:0002020,2.91e-07,34 | |||
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| ||
|short_description=p@chr14:73570051..73570166,+ | |short_description=p@chr14:73570051..73570166,+ | ||
}} | }} |
Latest revision as of 22:31, 24 July 2015
Short description: | p@chr14:73570051..73570166, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:73570051..73570166, + |
Coexpression cluster: | C1037_acute_medulloblastoma_Monocytederived_CD4_diffuse_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 4.03e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.03e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
neural tube | 9.10e-09 | 56 |
neural rod | 9.10e-09 | 56 |
future spinal cord | 9.10e-09 | 56 |
neural keel | 9.10e-09 | 56 |
nervous system | 5.04e-08 | 89 |
regional part of nervous system | 5.35e-08 | 53 |
regional part of brain | 5.35e-08 | 53 |
regional part of forebrain | 5.39e-08 | 41 |
forebrain | 5.39e-08 | 41 |
anterior neural tube | 5.39e-08 | 41 |
future forebrain | 5.39e-08 | 41 |
central nervous system | 6.04e-08 | 81 |
brain grey matter | 2.91e-07 | 34 |
gray matter | 2.91e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.15e-26 | 235 |
disease of cellular proliferation | 4.59e-26 | 239 |
cell type cancer | 1.24e-13 | 143 |
organ system cancer | 8.43e-13 | 137 |
hematologic cancer | 1.59e-11 | 51 |
immune system cancer | 1.59e-11 | 51 |
carcinoma | 1.49e-10 | 106 |
leukemia | 4.32e-10 | 39 |
myeloid leukemia | 1.91e-07 | 31 |