FFCP PHASE1:Hg19::chr14:75982154..75982176,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75982154..75982176,+ | |||
|coexpression_cluster_id=C507 | |coexpression_cluster_id=C507 | ||
|description=CAGE_peak_at_chr14:75982154..75982176,+ | |description=CAGE_peak_at_chr14:75982154..75982176,+ | ||
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|ontology_enrichment_celltype=CL:0000945!7.75e-35!24;CL:0000826!7.75e-35!24;CL:0000838!2.61e-21!52;CL:0000542!7.31e-21!53;CL:0000051!7.31e-21!53;CL:0000080!1.40e-19!6;CL:0000988!1.79e-13!182;CL:0000738!1.65e-11!140;CL:0002087!1.01e-10!119;CL:0000037!5.08e-10!172;CL:0000566!5.08e-10!172;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000946!8.15e-09!1;CL:0000786!8.15e-09!1;CL:0000980!8.15e-09!1;CL:0002031!9.54e-09!124;CL:0000990!1.74e-07!8 | |ontology_enrichment_celltype=CL:0000945!7.75e-35!24;CL:0000826!7.75e-35!24;CL:0000838!2.61e-21!52;CL:0000542!7.31e-21!53;CL:0000051!7.31e-21!53;CL:0000080!1.40e-19!6;CL:0000988!1.79e-13!182;CL:0000738!1.65e-11!140;CL:0002087!1.01e-10!119;CL:0000037!5.08e-10!172;CL:0000566!5.08e-10!172;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000946!8.15e-09!1;CL:0000786!8.15e-09!1;CL:0000980!8.15e-09!1;CL:0002031!9.54e-09!124;CL:0000990!1.74e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.57e-43;24!CL:0000946;1.07e-14;1!CL:0000786;1.07e-14;1!CL:0000542;1.67e-13;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.57e-43;24!CL:0000946;1.07e-14;1!CL:0000786;1.07e-14;1!CL:0000542;1.67e-13;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.57e-43,24;CL:0000826,1.57e-43,24;CL:0000838,1.68e-29,52;CL:0000542,6.36e-29,53;CL:0000051,6.36e-29,53;CL:0000946,9.36e-15,1;CL:0000786,9.36e-15,1;CL:0000980,9.36e-15,1;CL:0000988,4.65e-13,177;CL:0002087,1.47e-12,115;CL:0002031,5.49e-12,120;CL:0000738,1.96e-10,136;CL:0002032,1.29e-08,161;CL:0000837,1.29e-08,161;CL:0000037,3.35e-08,168;CL:0000785,5.02e-08,2;CL:0000955,5.02e-08,2;CL:0000818,5.02e-08,2;CL:0000954,5.02e-08,2;CL:0000816,5.02e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.67e-13;53!CL:0000954;5.37e-08;2 | |ontology_enrichment_development_v019=CL:0000051;1.67e-13;53!CL:0000954;5.37e-08;2 | ||
|ontology_enrichment_disease=DOID:0060058!4.35e-18!10;DOID:630!7.01e-09!1;DOID:0050177!7.01e-09!1;DOID:0050427!7.01e-09!1;DOID:0060060!1.27e-08!1;DOID:0060061!1.27e-08!1;DOID:8691!1.27e-08!1;DOID:2355!1.48e-08!1;DOID:4960!1.59e-08!1;DOID:0070004!1.59e-08!1;DOID:2531!5.47e-08!51;DOID:0060083!5.47e-08!51 | |ontology_enrichment_disease=DOID:0060058!4.35e-18!10;DOID:630!7.01e-09!1;DOID:0050177!7.01e-09!1;DOID:0050427!7.01e-09!1;DOID:0060060!1.27e-08!1;DOID:0060061!1.27e-08!1;DOID:8691!1.27e-08!1;DOID:2355!1.48e-08!1;DOID:4960!1.59e-08!1;DOID:0070004!1.59e-08!1;DOID:2531!5.47e-08!51;DOID:0060083!5.47e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.55e-21;10!DOID:630;7.13e-15;1!DOID:0050177;7.13e-15;1!DOID:0050427;7.13e-15;1!DOID:0060060;1.84e-14;1!DOID:0060061;1.84e-14;1!DOID:8691;1.84e-14;1!DOID:4960;2.75e-14;1!DOID:0070004;2.75e-14;1!DOID:2355;2.75e-14;1!DOID:74;8.60e-08;2 | |ontology_enrichment_disease_v019=DOID:0060058;2.55e-21;10!DOID:630;7.13e-15;1!DOID:0050177;7.13e-15;1!DOID:0050427;7.13e-15;1!DOID:0060060;1.84e-14;1!DOID:0060061;1.84e-14;1!DOID:8691;1.84e-14;1!DOID:4960;2.75e-14;1!DOID:0070004;2.75e-14;1!DOID:2355;2.75e-14;1!DOID:74;8.60e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.55e-21,10;DOID:630,7.13e-15,1;DOID:0050177,7.13e-15,1;DOID:0050427,7.13e-15,1;DOID:0060060,2.11e-14,1;DOID:0060061,2.11e-14,1;DOID:8691,2.11e-14,1;DOID:2355,2.75e-14,1;DOID:4960,3.15e-14,1;DOID:0070004,3.15e-14,1;DOID:2531,5.16e-09,51;DOID:0060083,5.16e-09,51;DOID:74,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.31e-08!15;UBERON:0000179!6.31e-08!15;UBERON:0000463!6.31e-08!15;UBERON:0002331!3.77e-07!10;UBERON:0000358!3.77e-07!10;UBERON:0000307!3.77e-07!10;UBERON:0000091!3.77e-07!10;UBERON:0000087!3.77e-07!10;UBERON:0007806!3.77e-07!10;UBERON:0008780!3.77e-07!10;UBERON:0005728!3.77e-07!10 | |ontology_enrichment_uberon=UBERON:0000178!6.31e-08!15;UBERON:0000179!6.31e-08!15;UBERON:0000463!6.31e-08!15;UBERON:0002331!3.77e-07!10;UBERON:0000358!3.77e-07!10;UBERON:0000307!3.77e-07!10;UBERON:0000091!3.77e-07!10;UBERON:0000087!3.77e-07!10;UBERON:0007806!3.77e-07!10;UBERON:0008780!3.77e-07!10;UBERON:0005728!3.77e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.75e-12;10!UBERON:0002390;6.62e-10;32!UBERON:0000178;1.64e-08;15!UBERON:0000179;1.64e-08;15!UBERON:0000463;1.64e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.75e-12;10!UBERON:0002390;6.62e-10;32!UBERON:0000178;1.64e-08;15!UBERON:0000179;1.64e-08;15!UBERON:0000463;1.64e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.68e-12,10;UBERON:0000358,1.68e-12,10;UBERON:0000307,1.68e-12,10;UBERON:0000091,1.68e-12,10;UBERON:0000087,1.68e-12,10;UBERON:0007010,1.68e-12,10;UBERON:0007806,1.68e-12,10;UBERON:0008780,1.68e-12,10;UBERON:0005728,1.68e-12,10;UBERON:0000178,1.60e-08,15;UBERON:0000179,1.60e-08,15;UBERON:0000463,1.60e-08,15 | |||
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|short_description=p@chr14:75982154..75982176,+ | |short_description=p@chr14:75982154..75982176,+ | ||
}} | }} |
Latest revision as of 22:53, 24 July 2015
Short description: | p@chr14:75982154..75982176, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75982154..75982176, + |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.57e-43 | 24 |
pro-B cell | 1.57e-43 | 24 |
lymphoid lineage restricted progenitor cell | 1.68e-29 | 52 |
lymphocyte | 6.36e-29 | 53 |
common lymphoid progenitor | 6.36e-29 | 53 |
antibody secreting cell | 9.36e-15 | 1 |
plasma cell | 9.36e-15 | 1 |
plasmablast | 9.36e-15 | 1 |
hematopoietic cell | 4.65e-13 | 177 |
nongranular leukocyte | 1.47e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.49e-12 | 120 |
leukocyte | 1.96e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.29e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-08 | 161 |
hematopoietic stem cell | 3.35e-08 | 168 |
mature B cell | 5.02e-08 | 2 |
pre-B-II cell | 5.02e-08 | 2 |
transitional stage B cell | 5.02e-08 | 2 |
small pre-B-II cell | 5.02e-08 | 2 |
immature B cell | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.68e-12 | 10 |
blastocyst | 1.68e-12 | 10 |
blastula | 1.68e-12 | 10 |
bilaminar disc | 1.68e-12 | 10 |
inner cell mass | 1.68e-12 | 10 |
cleaving embryo | 1.68e-12 | 10 |
connecting stalk | 1.68e-12 | 10 |
inner cell mass derived epiblast | 1.68e-12 | 10 |
extraembryonic mesoderm | 1.68e-12 | 10 |
blood | 1.60e-08 | 15 |
haemolymphatic fluid | 1.60e-08 | 15 |
organism substance | 1.60e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.55e-21 | 10 |
genetic disease | 7.13e-15 | 1 |
monogenic disease | 7.13e-15 | 1 |
xeroderma pigmentosum | 7.13e-15 | 1 |
non-Hodgkin lymphoma | 2.11e-14 | 1 |
cutaneous T cell lymphoma | 2.11e-14 | 1 |
mycosis fungoides | 2.11e-14 | 1 |
anemia | 2.75e-14 | 1 |
bone marrow cancer | 3.15e-14 | 1 |
myeloma | 3.15e-14 | 1 |
hematologic cancer | 5.16e-09 | 51 |
immune system cancer | 5.16e-09 | 51 |
hematopoietic system disease | 8.60e-08 | 2 |