FFCP PHASE1:Hg19::chr14:99701188..99701193,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:99701188..99701193,-
|short_description=p@chr14:99701188..99701193,-
|description=CAGE_peak_at_chr14:99701188..99701193,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:99701188..99701193,- | |||
|coexpression_cluster_id=C588 | |||
|description=CAGE_peak_at_chr14:99701188..99701193,- | |||
|id=chr14:99701188..99701193,- | |||
|ontology_enrichment_celltype=CL:0000084!3.19e-25!25;CL:0000827!3.19e-25!25;CL:0000791!9.91e-22!18;CL:0000789!9.91e-22!18;CL:0002420!9.91e-22!18;CL:0002419!9.91e-22!18;CL:0000790!9.91e-22!18;CL:0000625!5.53e-14!11;CL:0000838!5.97e-12!52;CL:0000542!1.50e-11!53;CL:0000051!1.50e-11!53;CL:0000624!7.91e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.99e-43;18!CL:0000789;3.99e-43;18!CL:0002419;3.99e-43;18!CL:0000084;4.30e-38;25!CL:0000625;1.16e-27;11!CL:0000624;5.46e-20;6!CL:0000542;2.44e-12;53!CL:0000623;6.79e-11;3!CL:0000226;9.27e-11;3!CL:0000842;9.27e-11;3!CL:0000898;3.04e-10;3!CL:0000815;2.22e-07;2!CL:0000792;2.22e-07;2!CL:0002677;2.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.50e-43,18;CL:0000789,2.50e-43,18;CL:0002420,2.50e-43,18;CL:0002419,2.50e-43,18;CL:0000790,2.50e-43,18;CL:0000084,3.03e-38,25;CL:0000827,3.03e-38,25;CL:0000625,7.60e-28,11;CL:0000838,1.54e-22,52;CL:0000542,5.24e-22,53;CL:0000051,5.24e-22,53;CL:0000624,5.15e-20,6;CL:0002087,3.55e-11,115;CL:0000623,6.60e-11,3;CL:0000825,6.60e-11,3;CL:0000226,9.45e-11,3;CL:0000842,9.45e-11,3;CL:0000898,2.82e-10,3;CL:0000738,1.70e-09,136;CL:0002031,1.65e-07,120;CL:0000815,1.96e-07,2;CL:0000792,1.96e-07,2;CL:0002677,1.96e-07,2;CL:0000037,2.81e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;3.99e-43;18!CL:0000051;2.44e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.07e-16!115;UBERON:0000178!4.01e-10!15;UBERON:0000179!4.01e-10!15;UBERON:0000463!4.01e-10!15;UBERON:0001017!3.64e-09!82;UBERON:0005743!8.47e-09!86;UBERON:0002020!1.60e-08!34;UBERON:0003528!1.60e-08!34;UBERON:0000073!2.71e-08!94;UBERON:0001016!2.71e-08!94;UBERON:0001893!9.31e-08!34;UBERON:0001869!1.04e-07!32;UBERON:0001049!2.10e-07!57;UBERON:0005068!2.10e-07!57;UBERON:0006241!2.10e-07!57;UBERON:0007135!2.10e-07!57;UBERON:0002791!3.39e-07!33;UBERON:0002780!4.58e-07!41;UBERON:0001890!4.58e-07!41;UBERON:0006240!4.58e-07!41;UBERON:0002308!8.86e-07!9;UBERON:0000125!8.86e-07!9;UBERON:0003080!9.12e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-22;15!UBERON:0000179;1.15e-22;15!UBERON:0000463;1.15e-22;15!UBERON:0002390;6.03e-11;32!UBERON:0002346;1.77e-07;4!UBERON:0000923;1.77e-07;4!UBERON:0010316;1.77e-07;4!UBERON:0005291;1.77e-07;4!UBERON:0000369;3.72e-07;4!UBERON:0002435;3.72e-07;4!UBERON:0000204;3.72e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.69e-22,15;UBERON:0000179,2.69e-22,15;UBERON:0000463,2.69e-22,15;UBERON:0000369,3.16e-07,4;UBERON:0002435,3.16e-07,4;UBERON:0000204,3.16e-07,4;UBERON:0010082,3.16e-07,4 | |||
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| ||
|short_description=p@chr14:99701188..99701193,- | |||
}} | }} |
Latest revision as of 00:11, 25 July 2015
Short description: | p@chr14:99701188..99701193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:99701188..99701193, - |
Coexpression cluster: | C588_CD4_neuroectodermal_thymus_CD8_neuroepithelioma_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.50e-43 | 18 |
alpha-beta T cell | 2.50e-43 | 18 |
immature T cell | 2.50e-43 | 18 |
mature T cell | 2.50e-43 | 18 |
immature alpha-beta T cell | 2.50e-43 | 18 |
T cell | 3.03e-38 | 25 |
pro-T cell | 3.03e-38 | 25 |
CD8-positive, alpha-beta T cell | 7.60e-28 | 11 |
lymphoid lineage restricted progenitor cell | 1.54e-22 | 52 |
lymphocyte | 5.24e-22 | 53 |
common lymphoid progenitor | 5.24e-22 | 53 |
CD4-positive, alpha-beta T cell | 5.15e-20 | 6 |
nongranular leukocyte | 3.55e-11 | 115 |
natural killer cell | 6.60e-11 | 3 |
pro-NK cell | 6.60e-11 | 3 |
single nucleate cell | 9.45e-11 | 3 |
mononuclear cell | 9.45e-11 | 3 |
naive T cell | 2.82e-10 | 3 |
leukocyte | 1.70e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.65e-07 | 120 |
regulatory T cell | 1.96e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.96e-07 | 2 |
naive regulatory T cell | 1.96e-07 | 2 |
hematopoietic stem cell | 2.81e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 2.69e-22 | 15 |
haemolymphatic fluid | 2.69e-22 | 15 |
organism substance | 2.69e-22 | 15 |
corpus striatum | 3.16e-07 | 4 |
striatum | 3.16e-07 | 4 |
ventral part of telencephalon | 3.16e-07 | 4 |
future corpus striatum | 3.16e-07 | 4 |