FFCP PHASE1:Hg19::chr15:101390060..101390073,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000431060_5end | |association_with_transcript=24bp_to_ENST00000431060_5end | ||
|cluster_id=chr15:101390060..101390073,+ | |||
|coexpression_cluster_id=C3473 | |coexpression_cluster_id=C3473 | ||
|description=CAGE_peak_2_at_ENST00000431060_5end | |description=CAGE_peak_2_at_ENST00000431060_5end | ||
|id=chr15:101390060..101390073,+ | |id=chr15:101390060..101390073,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.22e-08!254 | |ontology_enrichment_celltype=CL:0000066!1.22e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:1000415;4.04e-20;2!CL:1001319;1.21e-10;1!CL:1000600;1.21e-10;1!CL:0002379;1.21e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.45e-20,2;CL:0002379,9.05e-11,1;CL:1001319,1.10e-10,1;CL:1000600,1.10e-10,1;CL:0000066,2.09e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.12e-24!106;DOID:0050687!2.53e-20!143;DOID:162!3.49e-12!235;DOID:14566!4.09e-12!239;DOID:1749!6.63e-11!14 | |ontology_enrichment_disease=DOID:305!4.12e-24!106;DOID:0050687!2.53e-20!143;DOID:162!3.49e-12!235;DOID:14566!4.09e-12!239;DOID:1749!6.63e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.80e-17;14!DOID:3119;2.76e-11;14!DOID:3620;1.21e-10;1!DOID:3565;1.21e-10;1!DOID:3908;1.45e-08;5!DOID:305;3.86e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.77e-23,106;DOID:1749,5.61e-17,14;DOID:0050687,1.39e-16,143;DOID:162,9.42e-12,235;DOID:14566,1.90e-11,239;DOID:3119,2.79e-11,14;DOID:3620,9.05e-11,1;DOID:3565,9.05e-11,1;DOID:3908,1.27e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.19e-10!169;UBERON:0000925!1.19e-10!169;UBERON:0006595!1.19e-10!169;UBERON:0001264!1.32e-10!10;UBERON:0003922!1.32e-10!10;UBERON:0003923!1.32e-10!10;UBERON:0003924!1.32e-10!10;UBERON:0003921!1.32e-10!10;UBERON:0002075!3.69e-10!18;UBERON:0002108!3.82e-10!14;UBERON:0002114!5.66e-10!12;UBERON:0004921!8.68e-10!129;UBERON:0004185!8.68e-10!129;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0001045!1.82e-09!11;UBERON:0000077!4.29e-09!130;UBERON:0001737!3.17e-08!9;UBERON:0001041!9.25e-08!98;UBERON:0000160!1.52e-07!27;UBERON:0005409!2.44e-07!35;UBERON:0002323!2.44e-07!46;UBERON:0008947!4.47e-07!38;UBERON:0003258!4.47e-07!38 | |ontology_enrichment_uberon=UBERON:0004119!1.19e-10!169;UBERON:0000925!1.19e-10!169;UBERON:0006595!1.19e-10!169;UBERON:0001264!1.32e-10!10;UBERON:0003922!1.32e-10!10;UBERON:0003923!1.32e-10!10;UBERON:0003924!1.32e-10!10;UBERON:0003921!1.32e-10!10;UBERON:0002075!3.69e-10!18;UBERON:0002108!3.82e-10!14;UBERON:0002114!5.66e-10!12;UBERON:0004921!8.68e-10!129;UBERON:0004185!8.68e-10!129;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0001045!1.82e-09!11;UBERON:0000077!4.29e-09!130;UBERON:0001737!3.17e-08!9;UBERON:0001041!9.25e-08!98;UBERON:0000160!1.52e-07!27;UBERON:0005409!2.44e-07!35;UBERON:0002323!2.44e-07!46;UBERON:0008947!4.47e-07!38;UBERON:0003258!4.47e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;9.59e-14;3!UBERON:0002294;4.58e-13;7!UBERON:0001173;4.58e-13;7!UBERON:0002075;4.78e-13;18!UBERON:0004913;2.53e-11;1!UBERON:0003703;2.53e-11;1!UBERON:0001174;2.53e-11;1!UBERON:0004914;2.53e-11;1!UBERON:0000997;5.84e-11;1!UBERON:0005056;5.84e-11;1!UBERON:0004176;5.84e-11;1!UBERON:0004645;1.21e-10;1!UBERON:0001256;1.21e-10;1!UBERON:0001259;1.21e-10;1!UBERON:0000945;1.32e-08;5!UBERON:0010039;1.32e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.02e-13,3;UBERON:0006242,1.02e-13,3;UBERON:0002075,4.84e-13,18;UBERON:0004913,2.53e-11,1;UBERON:0003703,2.53e-11,1;UBERON:0001174,2.53e-11,1;UBERON:0004914,2.53e-11,1;UBERON:0000997,5.05e-11,1;UBERON:0005056,5.05e-11,1;UBERON:0004645,1.10e-10,1;UBERON:0001256,1.10e-10,1;UBERON:0001259,1.10e-10,1;UBERON:0002294,2.87e-10,9;UBERON:0001173,2.87e-10,9;UBERON:0004912,2.87e-10,9 | |||
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| ||
|short_description=p2@ENST00000431060 | |short_description=p2@ENST00000431060 | ||
}} | }} |
Latest revision as of 00:17, 25 July 2015
Short description: | p2@ENST00000431060 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000431060_5end |
Coexpression cluster: | C3473_bronchioalveolar_papillotubular_gastric_gall_squamous_malignant_embryonic |
Association with transcript: | 24bp_to_ENST00000431060_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.45e-20 | 2 |
meningothelial cell | 9.05e-11 | 1 |
bladder cell | 1.10e-10 | 1 |
lower urinary tract cell | 1.10e-10 | 1 |
epithelial cell | 2.09e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.02e-13 | 3 |
gall bladder primordium | 1.02e-13 | 3 |
viscus | 4.84e-13 | 18 |
hepatopancreatic ampulla | 2.53e-11 | 1 |
extrahepatic bile duct | 2.53e-11 | 1 |
common bile duct | 2.53e-11 | 1 |
duodenal papilla | 2.53e-11 | 1 |
mammalian vulva | 5.05e-11 | 1 |
external female genitalia | 5.05e-11 | 1 |
urinary bladder urothelium | 1.10e-10 | 1 |
wall of urinary bladder | 1.10e-10 | 1 |
mucosa of urinary bladder | 1.10e-10 | 1 |
biliary system | 2.87e-10 | 9 |
biliary tree | 2.87e-10 | 9 |
biliary bud | 2.87e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.77e-23 | 106 |
squamous cell carcinoma | 5.61e-17 | 14 |
cell type cancer | 1.39e-16 | 143 |
cancer | 9.42e-12 | 235 |
disease of cellular proliferation | 1.90e-11 | 239 |
gastrointestinal system cancer | 2.79e-11 | 14 |
central nervous system cancer | 9.05e-11 | 1 |
meningioma | 9.05e-11 | 1 |
non-small cell lung carcinoma | 1.27e-08 | 5 |