FFCP PHASE1:Hg19::chr15:28878244..28878278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC=30495 | |HGNC=HGNC:30495 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000382946,ENST00000524476,ENST00000529353,uc010aza.1,uc010azb.1_5end | |association_with_transcript=0bp_to_ENST00000382946,ENST00000524476,ENST00000529353,uc010aza.1,uc010azb.1_5end | ||
|cluster_id=chr15:28878244..28878278,+ | |||
|coexpression_cluster_id=C375 | |coexpression_cluster_id=C375 | ||
|description=CAGE_peak_3_at_HERC2P9_5end | |description=CAGE_peak_3_at_HERC2P9_5end |
Revision as of 00:35, 25 July 2015
Short description: | p3@HERC2P9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HERC2P9_5end |
Coexpression cluster: | C375_optic_Cardiac_occipital_hippocampus_amygdala_heart_vagina |
Association with transcript: | 0bp_to_ENST00000382946, ENST00000524476, ENST00000529353, uc010aza.1, uc010azb.1_5end |
EntrezGene: | NA |
HGNC: | 30495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@HERC2P9 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 9.33e-08 | 6 |
endothelial cell of lymphatic vessel | 9.33e-08 | 6 |
vascular lymphangioblast | 9.33e-08 | 6 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 4.50e-34 | 56 |
neural rod | 4.50e-34 | 56 |
future spinal cord | 4.50e-34 | 56 |
neural keel | 4.50e-34 | 56 |
regional part of nervous system | 5.71e-31 | 53 |
regional part of brain | 5.71e-31 | 53 |
neural plate | 2.08e-26 | 82 |
presumptive neural plate | 2.08e-26 | 82 |
neurectoderm | 4.24e-25 | 86 |
regional part of forebrain | 1.07e-23 | 41 |
Showing 1 to 10 of 97 entries