FFCP PHASE1:Hg19::chr16:73081473..73081479,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:73081473..73081479,+
|short_description=p@chr16:73081473..73081479,+
|description=CAGE_peak_at_chr16:73081473..73081479,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:73081473..73081479,+ | |||
|description=CAGE_peak_at_chr16:73081473..73081479,+ | |||
|id=chr16:73081473..73081479,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.25e-09!75;CL:0000055!3.69e-09!180;CL:0002620!2.69e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.87e-22;3!CL:0000346;9.35e-11;3!CL:1000428;9.35e-11;3!CL:0000511;3.09e-08;1!CL:0002625;3.09e-08;1!CL:0000228;3.09e-08;1!CL:0002581;3.09e-08;1!CL:0000216;3.09e-08;1!CL:0002372;3.09e-08;1!CL:0000062;1.95e-07;9!CL:0002559;8.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.30e-22,3;CL:0000346,9.18e-11,3;CL:1000428,9.18e-11,3;CL:0000511,2.02e-08,1;CL:0002625,2.02e-08,1;CL:0000216,2.02e-08,1;CL:0002581,2.33e-08,1;CL:0000228,2.50e-08,1;CL:0002372,2.50e-08,1;CL:0000057,2.20e-07,76;CL:0002559,8.82e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.61e-07!14;UBERON:0000158!1.61e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;9.41e-17;4!UBERON:0000412;9.35e-11;3!UBERON:0001992;9.35e-11;3!UBERON:0001136;3.09e-08;1!UBERON:0001343;3.09e-08;1!UBERON:0007195;3.09e-08;1!UBERON:0004910;3.09e-08;1!UBERON:0004813;3.09e-08;1!UBERON:0002073;8.92e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,6.37e-17,4;UBERON:0004340,6.37e-17,4;UBERON:0000412,9.18e-11,3;UBERON:0001992,9.18e-11,3;UBERON:0003124,6.90e-10,7;UBERON:0001136,2.02e-08,1;UBERON:0001343,2.02e-08,1;UBERON:0004910,2.02e-08,1;UBERON:0005154,2.02e-08,1;UBERON:0005295,2.02e-08,1;UBERON:0004813,2.02e-08,1;UBERON:0005297,2.02e-08,1;UBERON:0005294,2.02e-08,1;UBERON:0010141,2.02e-08,1;UBERON:0005891,2.02e-08,1;UBERON:0007195,4.11e-08,1;UBERON:0002073,8.82e-07,5;UBERON:0005086,8.82e-07,5 | |||
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| ||
|short_description=p@chr16:73081473..73081479,+ | |||
}} | }} |
Latest revision as of 12:13, 25 July 2015
Short description: | p@chr16:73081473..73081479, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:73081473..73081479, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.30e-22 | 3 |
hair follicle dermal papilla cell | 9.18e-11 | 3 |
stem cell of epidermis | 9.18e-11 | 3 |
androgen binding protein secreting cell | 2.02e-08 | 1 |
seminiferous tubule epithelial cell | 2.02e-08 | 1 |
Sertoli cell | 2.02e-08 | 1 |
perirenal preadipocyte | 2.33e-08 | 1 |
multinucleate cell | 2.50e-08 | 1 |
myotube | 2.50e-08 | 1 |
fibroblast | 2.20e-07 | 76 |
hair follicle cell | 8.82e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
placenta | 6.37e-17 | 4 |
allantois | 6.37e-17 | 4 |
dermal papilla | 9.18e-11 | 3 |
papillary layer of dermis | 9.18e-11 | 3 |
chorion | 6.90e-10 | 7 |
mesothelium | 2.02e-08 | 1 |
seminiferous tubule of testis | 2.02e-08 | 1 |
epithelium of male gonad | 2.02e-08 | 1 |
epithelial cord | 2.02e-08 | 1 |
sex cord | 2.02e-08 | 1 |
seminiferous tubule epithelium | 2.02e-08 | 1 |
testis sex cord | 2.02e-08 | 1 |
genital ridge | 2.02e-08 | 1 |
primitive sex cord of indifferent gonad | 2.02e-08 | 1 |
coelomic epithelium | 2.02e-08 | 1 |
stroma of bone marrow | 4.11e-08 | 1 |
hair follicle | 8.82e-07 | 5 |
hair follicle placode | 8.82e-07 | 5 |