FFCP PHASE1:Hg19::chr16:79632532..79632560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:79632532..79632560,- | |||
|coexpression_cluster_id=C761 | |coexpression_cluster_id=C761 | ||
|description=CAGE_peak_at_chr16:79632532..79632560,- | |description=CAGE_peak_at_chr16:79632532..79632560,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-30!115;UBERON:0001049!5.69e-17!57;UBERON:0005068!5.69e-17!57;UBERON:0006241!5.69e-17!57;UBERON:0007135!5.69e-17!57;UBERON:0002616!6.20e-14!59;UBERON:0003080!2.99e-13!42;UBERON:0003075!3.04e-13!86;UBERON:0007284!3.04e-13!86;UBERON:0001017!4.48e-13!82;UBERON:0002780!1.50e-12!41;UBERON:0001890!1.50e-12!41;UBERON:0006240!1.50e-12!41;UBERON:0005743!2.64e-12!86;UBERON:0000955!3.19e-12!69;UBERON:0006238!3.19e-12!69;UBERON:0002346!8.96e-12!90;UBERON:0001893!4.32e-11!34;UBERON:0002020!4.83e-11!34;UBERON:0003528!4.83e-11!34;UBERON:0002791!7.02e-11!33;UBERON:0001869!4.08e-10!32;UBERON:0002619!5.48e-10!22;UBERON:0000956!2.03e-09!25;UBERON:0000203!2.03e-09!25;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0003056!4.72e-09!61;UBERON:0001950!6.55e-09!20;UBERON:0000153!8.97e-09!129;UBERON:0007811!8.97e-09!129;UBERON:0000033!9.99e-08!123 | |ontology_enrichment_uberon=UBERON:0007023!1.13e-30!115;UBERON:0001049!5.69e-17!57;UBERON:0005068!5.69e-17!57;UBERON:0006241!5.69e-17!57;UBERON:0007135!5.69e-17!57;UBERON:0002616!6.20e-14!59;UBERON:0003080!2.99e-13!42;UBERON:0003075!3.04e-13!86;UBERON:0007284!3.04e-13!86;UBERON:0001017!4.48e-13!82;UBERON:0002780!1.50e-12!41;UBERON:0001890!1.50e-12!41;UBERON:0006240!1.50e-12!41;UBERON:0005743!2.64e-12!86;UBERON:0000955!3.19e-12!69;UBERON:0006238!3.19e-12!69;UBERON:0002346!8.96e-12!90;UBERON:0001893!4.32e-11!34;UBERON:0002020!4.83e-11!34;UBERON:0003528!4.83e-11!34;UBERON:0002791!7.02e-11!33;UBERON:0001869!4.08e-10!32;UBERON:0002619!5.48e-10!22;UBERON:0000956!2.03e-09!25;UBERON:0000203!2.03e-09!25;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0003056!4.72e-09!61;UBERON:0001950!6.55e-09!20;UBERON:0000153!8.97e-09!129;UBERON:0007811!8.97e-09!129;UBERON:0000033!9.99e-08!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.47e-10;22!UBERON:0001950;2.53e-09;20!UBERON:0000956;2.45e-08;25!UBERON:0000203;2.45e-08;25!UBERON:0002791;3.32e-07;32!UBERON:0003528;6.42e-07;34!UBERON:0002020;6.42e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0002619;7.47e-10;22!UBERON:0001950;2.53e-09;20!UBERON:0000956;2.45e-08;25!UBERON:0000203;2.45e-08;25!UBERON:0002791;3.32e-07;32!UBERON:0003528;6.42e-07;34!UBERON:0002020;6.42e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.92e-16,114;UBERON:0002619,3.85e-10,22;UBERON:0001950,1.36e-09,20;UBERON:0003528,1.07e-08,34;UBERON:0002020,1.07e-08,34;UBERON:0000956,1.39e-08,25;UBERON:0000203,1.39e-08,25;UBERON:0001049,1.80e-08,56;UBERON:0005068,1.80e-08,56;UBERON:0006241,1.80e-08,56;UBERON:0007135,1.80e-08,56;UBERON:0002791,2.94e-08,32;UBERON:0002780,1.41e-07,41;UBERON:0001890,1.41e-07,41;UBERON:0003080,1.41e-07,41;UBERON:0006240,1.41e-07,41;UBERON:0001893,1.43e-07,34;UBERON:0001869,4.59e-07,32 | |||
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| ||
|short_description=p@chr16:79632532..79632560,- | |short_description=p@chr16:79632532..79632560,- | ||
}} | }} |
Latest revision as of 12:35, 25 July 2015
Short description: | p@chr16:79632532..79632560, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:79632532..79632560, - |
Coexpression cluster: | C761_myeloma_CD14_small_CD4_colon_duodenum_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.92e-16 | 114 |
regional part of cerebral cortex | 3.85e-10 | 22 |
neocortex | 1.36e-09 | 20 |
brain grey matter | 1.07e-08 | 34 |
gray matter | 1.07e-08 | 34 |
cerebral cortex | 1.39e-08 | 25 |
pallium | 1.39e-08 | 25 |
neural tube | 1.80e-08 | 56 |
neural rod | 1.80e-08 | 56 |
future spinal cord | 1.80e-08 | 56 |
neural keel | 1.80e-08 | 56 |
regional part of telencephalon | 2.94e-08 | 32 |
regional part of forebrain | 1.41e-07 | 41 |
forebrain | 1.41e-07 | 41 |
anterior neural tube | 1.41e-07 | 41 |
future forebrain | 1.41e-07 | 41 |
telencephalon | 1.43e-07 | 34 |
cerebral hemisphere | 4.59e-07 | 32 |