FFCP PHASE1:Hg19::chr16:79679414..79679446,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:79679414..79679446,+ | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_at_chr16:79679414..79679446,+ | |||
|id=chr16:79679414..79679446,+ | |||
|ontology_enrichment_celltype=CL:0002621!6.94e-19!3;CL:0002327!2.19e-14!4;CL:0002076!2.57e-12!43;CL:0002159!4.19e-12!13;CL:0000066!4.89e-10!254;CL:0002251!8.52e-10!21;CL:0002166!1.90e-09!3;CL:0000223!1.64e-08!59;CL:0002077!2.27e-08!33;CL:0000362!9.83e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.06e-22;14!CL:0002166;9.12e-18;3!CL:0002327;2.66e-13;4!CL:0000362;3.37e-13;9!CL:0000312;3.81e-11;5!CL:0000240;1.95e-09;6!CL:0000311;1.95e-09;6!CL:0000079;1.95e-09;6!CL:0000237;1.95e-09;6!CL:0002077;4.42e-08;34!CL:0002535;9.86e-08;2!CL:0000317;1.75e-07;2!CL:1000448;1.75e-07;2!CL:0002308;1.75e-07;2!CL:0002140;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.64e-22,14;CL:0002166,1.28e-17,3;CL:0002327,2.21e-13,4;CL:0000362,3.59e-13,9;CL:0000312,3.72e-11,5;CL:0000240,1.91e-09,6;CL:0000311,1.91e-09,6;CL:0000079,1.91e-09,6;CL:0000237,1.91e-09,6;CL:0000036,1.91e-09,6;CL:0000357,1.91e-09,6;CL:0000114,1.91e-09,6;CL:0002077,3.60e-09,34;CL:0002535,9.87e-08,2;CL:0000317,1.99e-07,2;CL:1000448,1.99e-07,2;CL:0002308,1.99e-07,2;CL:0002140,1.99e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;1.95e-09;6!CL:0000114;1.95e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!1.02e-10!14;DOID:3151!1.95e-07!1;DOID:3149!1.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;5.03e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.92e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001949!6.94e-19!3;UBERON:0001911!2.19e-14!4;UBERON:0005333!2.19e-14!4;UBERON:0008425!2.19e-14!4;UBERON:0005311!2.19e-14!4;UBERON:0000076!1.97e-07!8;UBERON:0001828!2.15e-07!8;UBERON:0001708!2.75e-07!4;UBERON:0001704!2.75e-07!4;UBERON:0000997!4.34e-07!1;UBERON:0005056!4.34e-07!1;UBERON:0000166!5.30e-07!21;UBERON:0003343!7.06e-07!4;UBERON:0004785!7.06e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.42e-13;4!UBERON:0008895;1.42e-13;4!UBERON:0001911;2.66e-13;4!UBERON:0011159;4.78e-11;5!UBERON:0000002;2.45e-09;6!UBERON:0001560;2.45e-09;6!UBERON:0001003;3.87e-08;15!UBERON:0007376;3.87e-08;15!UBERON:0006955;9.86e-08;2!UBERON:0004801;9.86e-08;2!UBERON:0002419;1.75e-07;2!UBERON:0007771;1.75e-07;2!UBERON:0003297;1.75e-07;2!UBERON:0001821;1.75e-07;2!UBERON:0003487;1.75e-07;2!UBERON:0001820;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.83e-13,4;UBERON:0008895,1.83e-13,4;UBERON:0001911,2.21e-13,4;UBERON:0005333,2.21e-13,4;UBERON:0008425,2.21e-13,4;UBERON:0005311,2.21e-13,4;UBERON:0011159,5.85e-11,5;UBERON:0000002,1.99e-09,6;UBERON:0001560,1.99e-09,6;UBERON:0010188,2.78e-09,6;UBERON:0002539,2.78e-09,6;UBERON:0008816,2.78e-09,6;UBERON:0001003,4.02e-08,15;UBERON:0007376,4.02e-08,15;UBERON:0007383,4.02e-08,15;UBERON:0006955,9.87e-08,2;UBERON:0004801,9.87e-08,2;UBERON:0002419,1.99e-07,2;UBERON:0007771,1.99e-07,2;UBERON:0003297,1.99e-07,2;UBERON:0001821,1.99e-07,2;UBERON:0003487,1.99e-07,2;UBERON:0001820,1.99e-07,2;UBERON:0005089,1.99e-07,2;UBERON:0005088,1.99e-07,2;UBERON:0000076,3.90e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94653948121054,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,1.14721838155602,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95101027471052,0,2.91534019993729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4306774867156,1.13420077793909,0.0895585227028483,1.45316969256981,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.495854746082934,2.11409074101617,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95193241990045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,5.04943398166335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr16:79679414..79679446,+ | |||
}} |
Latest revision as of 12:36, 25 July 2015
Short description: | p@chr16:79679414..79679446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:79679414..79679446, + |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.64e-22 | 14 |
epithelial cell of Malassez | 1.28e-17 | 3 |
mammary gland epithelial cell | 2.21e-13 | 4 |
epidermal cell | 3.59e-13 | 9 |
keratinocyte | 3.72e-11 | 5 |
stratified squamous epithelial cell | 1.91e-09 | 6 |
keratin accumulating cell | 1.91e-09 | 6 |
stratified epithelial cell | 1.91e-09 | 6 |
keratinizing barrier epithelial cell | 1.91e-09 | 6 |
epithelial fate stem cell | 1.91e-09 | 6 |
stratified epithelial stem cell | 1.91e-09 | 6 |
surface ectodermal cell | 1.91e-09 | 6 |
ecto-epithelial cell | 3.60e-09 | 34 |
epithelial cell of cervix | 9.87e-08 | 2 |
sebum secreting cell | 1.99e-07 | 2 |
epithelial cell of sweat gland | 1.99e-07 | 2 |
epithelial cell of skin gland | 1.99e-07 | 2 |
acinar cell of sebaceous gland | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.83e-13 | 4 |
splanchnocranium | 1.83e-13 | 4 |
mammary gland | 2.21e-13 | 4 |
mammary bud | 2.21e-13 | 4 |
mammary ridge | 2.21e-13 | 4 |
mammary placode | 2.21e-13 | 4 |
primary subdivision of cranial skeletal system | 5.85e-11 | 5 |
uterine cervix | 1.99e-09 | 6 |
neck of organ | 1.99e-09 | 6 |
protuberance | 2.78e-09 | 6 |
pharyngeal arch | 2.78e-09 | 6 |
embryonic head | 2.78e-09 | 6 |
skin epidermis | 4.02e-08 | 15 |
outer epithelium | 4.02e-08 | 15 |
enveloping layer of ectoderm | 4.02e-08 | 15 |
uterine epithelium | 9.87e-08 | 2 |
cervix epithelium | 9.87e-08 | 2 |
skin gland | 1.99e-07 | 2 |
epidermis gland | 1.99e-07 | 2 |
gland of integumental system | 1.99e-07 | 2 |
sebaceous gland | 1.99e-07 | 2 |
skin sebaceous gland | 1.99e-07 | 2 |
sweat gland | 1.99e-07 | 2 |
sweat gland placode | 1.99e-07 | 2 |
sebaceous gland placode | 1.99e-07 | 2 |
external ectoderm | 3.90e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.92e-11 | 5 |