FFCP PHASE1:Hg19::chr16:85617034..85617043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85617034..85617043,- | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr16:85617034..85617043,- | |description=CAGE_peak_at_chr16:85617034..85617043,- | ||
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|ontology_enrichment_celltype=CL:0000346!3.54e-09!3;CL:1000428!3.54e-09!3;CL:0000128!4.22e-08!7;CL:0000126!4.22e-08!7;CL:0000127!4.22e-08!7;CL:0002453!4.22e-08!7;CL:0000133!6.63e-08!59;CL:0002319!2.81e-07!25;CL:0002559!4.44e-07!4;CL:0002574!8.67e-07!1 | |ontology_enrichment_celltype=CL:0000346!3.54e-09!3;CL:1000428!3.54e-09!3;CL:0000128!4.22e-08!7;CL:0000126!4.22e-08!7;CL:0000127!4.22e-08!7;CL:0002453!4.22e-08!7;CL:0000133!6.63e-08!59;CL:0002319!2.81e-07!25;CL:0002559!4.44e-07!4;CL:0002574!8.67e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000346;4.68e-66;3!CL:1000428;4.68e-66;3!CL:0002559;3.31e-40;5!CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7 | |ontology_enrichment_celltype_v019=CL:0000346;4.68e-66;3!CL:1000428;4.68e-66;3!CL:0002559;3.31e-40;5!CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,4.68e-66,3;CL:1000428,4.68e-66,3;CL:0002559,3.31e-40,5;CL:0000306,1.13e-13,4;CL:0002222,1.13e-13,4;CL:0002224,1.13e-13,4;CL:0000333,2.84e-11,41;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:0000133,3.34e-08,59;CL:0000221,6.64e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000221;4.06e-08;72 | |ontology_enrichment_development_v019=CL:0000221;4.06e-08;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000412!3.54e-09!3;UBERON:0001992!3.54e-09!3;UBERON:0005705!3.20e-07!1;UBERON:0008193!3.20e-07!1;UBERON:0002514!3.20e-07!1;UBERON:0003462!3.20e-07!1;UBERON:0008001!3.20e-07!1;UBERON:0007914!3.20e-07!1;UBERON:0003457!3.20e-07!1;UBERON:0009292!3.20e-07!1;UBERON:0007375!3.20e-07!1;UBERON:0003323!3.20e-07!1;UBERON:0002397!3.20e-07!1;UBERON:0001709!3.20e-07!1;UBERON:0004066!3.20e-07!1;UBERON:0002244!3.20e-07!1;UBERON:0005620!3.20e-07!1;UBERON:0004068!3.20e-07!1;UBERON:0004362!3.20e-07!1;UBERON:0002073!4.44e-07!4;UBERON:0005086!4.44e-07!4;UBERON:0002902!9.73e-07!1;UBERON:0009899!9.73e-07!1 | |ontology_enrichment_uberon=UBERON:0000412!3.54e-09!3;UBERON:0001992!3.54e-09!3;UBERON:0005705!3.20e-07!1;UBERON:0008193!3.20e-07!1;UBERON:0002514!3.20e-07!1;UBERON:0003462!3.20e-07!1;UBERON:0008001!3.20e-07!1;UBERON:0007914!3.20e-07!1;UBERON:0003457!3.20e-07!1;UBERON:0009292!3.20e-07!1;UBERON:0007375!3.20e-07!1;UBERON:0003323!3.20e-07!1;UBERON:0002397!3.20e-07!1;UBERON:0001709!3.20e-07!1;UBERON:0004066!3.20e-07!1;UBERON:0002244!3.20e-07!1;UBERON:0005620!3.20e-07!1;UBERON:0004068!3.20e-07!1;UBERON:0004362!3.20e-07!1;UBERON:0002073!4.44e-07!4;UBERON:0005086!4.44e-07!4;UBERON:0002902!9.73e-07!1;UBERON:0009899!9.73e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;4.68e-66;3!UBERON:0001992;4.68e-66;3!UBERON:0002073;3.31e-40;5!UBERON:0002067;6.41e-23;9!UBERON:0010371;6.78e-15;31!UBERON:0001003;3.15e-14;15!UBERON:0007376;3.15e-14;15!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4 | |ontology_enrichment_uberon_v019=UBERON:0000412;4.68e-66;3!UBERON:0001992;4.68e-66;3!UBERON:0002073;3.31e-40;5!UBERON:0002067;6.41e-23;9!UBERON:0010371;6.78e-15;31!UBERON:0001003;3.15e-14;15!UBERON:0007376;3.15e-14;15!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,4.68e-66,3;UBERON:0001992,4.68e-66,3;UBERON:0002073,3.31e-40,5;UBERON:0005086,3.31e-40,5;UBERON:0002067,6.41e-23,9;UBERON:0004016,6.41e-23,9;UBERON:0010083,6.41e-23,9;UBERON:0005085,3.16e-15,31;UBERON:0001003,3.15e-14,15;UBERON:0007376,3.15e-14,15;UBERON:0007383,3.15e-14,15;UBERON:0010077,1.13e-13,4;UBERON:0005389,1.13e-13,4;UBERON:0000484,1.13e-13,4;UBERON:0002546,1.13e-13,4;UBERON:0000965,1.13e-13,4;UBERON:0001803,1.13e-13,4;UBERON:0003073,1.13e-13,4;UBERON:0005426,1.13e-13,4;UBERON:0000076,1.69e-07,8 | |||
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|short_description=p@chr16:85617034..85617043,- | |short_description=p@chr16:85617034..85617043,- | ||
}} | }} |
Latest revision as of 13:00, 25 July 2015
Short description: | p@chr16:85617034..85617043, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85617034..85617043, - |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 4.68e-66 | 3 |
stem cell of epidermis | 4.68e-66 | 3 |
hair follicle cell | 3.31e-40 | 5 |
crystallin accumulating cell | 1.13e-13 | 4 |
vertebrate lens cell | 1.13e-13 | 4 |
lens epithelial cell | 1.13e-13 | 4 |
migratory neural crest cell | 2.84e-11 | 41 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
neurectodermal cell | 3.34e-08 | 59 |
ectodermal cell | 6.64e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 4.68e-66 | 3 |
papillary layer of dermis | 4.68e-66 | 3 |
hair follicle | 3.31e-40 | 5 |
hair follicle placode | 3.31e-40 | 5 |
dermis | 6.41e-23 | 9 |
dermatome | 6.41e-23 | 9 |
future dermis | 6.41e-23 | 9 |
ectodermal placode | 3.16e-15 | 31 |
skin epidermis | 3.15e-14 | 15 |
outer epithelium | 3.15e-14 | 15 |
enveloping layer of ectoderm | 3.15e-14 | 15 |
cuboidal epithelium | 1.13e-13 | 4 |
transparent eye structure | 1.13e-13 | 4 |
simple cuboidal epithelium | 1.13e-13 | 4 |
cranial placode | 1.13e-13 | 4 |
lens of camera-type eye | 1.13e-13 | 4 |
epithelium of lens | 1.13e-13 | 4 |
lens placode | 1.13e-13 | 4 |
lens vesicle | 1.13e-13 | 4 |
external ectoderm | 1.69e-07 | 8 |