FFCP PHASE1:Hg19::chr17:32578390..32578428,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:32578390..32578428,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr17:32578390..32578428,+ | |||
|id=chr17:32578390..32578428,+ | |||
|ontology_enrichment_celltype=CL:0002494!3.56e-09!16;CL:0000839!4.03e-08!70;CL:0002605!4.18e-08!3;CL:0000557!6.04e-08!71;CL:0002194!2.61e-07!63;CL:0000576!2.61e-07!63;CL:0000040!2.61e-07!63;CL:0000559!2.61e-07!63;CL:0000144!3.07e-07!625;CL:0000766!3.89e-07!76;CL:0000034!5.71e-07!444;CL:0002009!5.72e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.60e-25;6!CL:0002548;3.26e-12;6!CL:0002097;1.71e-09;2!CL:0002589;1.71e-09;2!CL:0000163;2.37e-08;9!CL:0000174;9.64e-07;3!CL:0000346;9.64e-07;3!CL:1000428;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.81e-25,6;CL:0002548,3.26e-12,6;CL:0002589,1.86e-09,2;CL:0002097,2.02e-09,2;CL:0000163,2.55e-08,9;CL:0000346,9.12e-07,3;CL:1000428,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;5.72e-18;1!DOID:74;1.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.44e-18,1;DOID:74,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003081!1.51e-07!216;UBERON:0002204!7.64e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.71e-09;2!UBERON:0007204;1.71e-09;2!UBERON:0002369;9.64e-07;3!UBERON:0001235;9.64e-07;3!UBERON:0006858;9.64e-07;3!UBERON:0000412;9.64e-07;3!UBERON:0001992;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,1.86e-09,2;UBERON:0007204,1.86e-09,2;UBERON:0000412,9.12e-07,3;UBERON:0001992,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0.85870796139317,0.273748850145768,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,7.47242970107935,5.67335361359468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866198686566443,0.925971025153221,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0,0,0,0,22.1698457053175,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,2.43247561282381,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.462629081407967,0.532685175939381,0.328508624055237,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,1.14499909393593,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87889329023667,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.443565449968902,0.318593534327405,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0.179088841081487,0.926404341482917,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0,0,0,0,0,0.215927591218621,0,0.285906176706625,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:32578390..32578428,+ | |||
}} |
Latest revision as of 15:32, 25 July 2015
Short description: | p@chr17:32578390..32578428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:32578390..32578428, + |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.81e-25 | 6 |
cardiac fibroblast | 3.26e-12 | 6 |
smooth muscle cell of the brachiocephalic vasculature | 1.86e-09 | 2 |
cortical cell of adrenal gland | 2.02e-09 | 2 |
endocrine cell | 2.55e-08 | 9 |
hair follicle dermal papilla cell | 9.12e-07 | 3 |
stem cell of epidermis | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 1.86e-09 | 2 |
brachiocephalic vasculature | 1.86e-09 | 2 |
dermal papilla | 9.12e-07 | 3 |
papillary layer of dermis | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.44e-18 | 1 |
hematopoietic system disease | 1.03e-09 | 2 |