FFCP PHASE1:Hg19::chr17:7367117..7367137,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:7367117..7367137,- | |||
|description=CAGE_peak_at_chr17:7367117..7367137,- | |||
|id=chr17:7367117..7367137,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.28e-26;5!CL:0002581;1.54e-15;1!CL:0002591;1.54e-15;1!CL:0000163;8.25e-15;9!CL:0000151;7.86e-09;36!CL:0002593;2.00e-08;2!CL:0000153;3.04e-07;9!CL:0000447;3.04e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.79e-26,5;CL:0002028,2.79e-26,5;CL:0002581,1.16e-15,1;CL:0002591,1.78e-15,1;CL:0000163,6.53e-15,9;CL:0000151,7.59e-10,36;CL:0002593,2.31e-08,2;CL:0000153,3.67e-07,9;CL:0000447,3.67e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.00e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.29e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.74e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.00e-08;2!UBERON:0002757;2.00e-08;2!UBERON:0010134;2.00e-08;2!UBERON:0000078;2.00e-08;2!UBERON:0005408;2.00e-08;2!UBERON:0002012;2.00e-08;2!UBERON:0005406;2.00e-08;2!UBERON:0002456;2.00e-08;2!UBERON:0001899;2.00e-08;2!UBERON:0008886;2.00e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.73e-08,2;UBERON:0000078,2.15e-08,2;UBERON:0007497,2.15e-08,2;UBERON:0003643,2.15e-08,2;UBERON:0003504,2.15e-08,2;UBERON:0003469,2.15e-08,2;UBERON:0003496,2.15e-08,2;UBERON:0002012,2.15e-08,2;UBERON:0008886,2.15e-08,2;UBERON:0007303,2.15e-08,2;UBERON:0002061,2.15e-08,2;UBERON:0005432,2.15e-08,2;UBERON:0004363,2.15e-08,2;UBERON:0002456,2.31e-08,2;UBERON:0001905,2.87e-08,2;UBERON:0002757,2.87e-08,2;UBERON:0010134,2.87e-08,2;UBERON:0005408,2.87e-08,2;UBERON:0001899,2.87e-08,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0.671746422719773,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,1.00267582127178,0.579386075843295,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0.364295288292542,0,0.324547393654683,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0.368199594569197,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.528290604079356,1.03664057770386,1.72943944100354,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0.355123450626254,0,0,0.232420756919918,0.120859449591622,0,0.184161977871793,0,0,0.917870904715969,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0,0.30347334256665,0,0,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,1.05650146756755,0.272999822815972,0.989838023675989,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,1.31717957183961,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0.511572370226872,0.394573622547734,0,0,0,0,0,0.520855522170466,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.538651809526579,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0.366078794705889,0.625954653532499,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0.467426619694449,0,0.189403005275089,0,0.889811221596536,0.457680136793847,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0,1.04349012362347,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0,0.0691572524642179,0,0,0.490738592505128,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0.127762427639595,0.535701835878287,1.00885116665647,0,0,0,0.115233987555779,0.171488009437418,0.0679697329768317,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,1.9307228228694,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:7367117..7367137,- | |||
}} |
Latest revision as of 21:10, 25 July 2015
Short description: | p@chr17:7367117..7367137, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7367117..7367137, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.79e-26 | 5 |
basophil mast progenitor cell | 2.79e-26 | 5 |
perirenal preadipocyte | 1.16e-15 | 1 |
smooth muscle cell of the pulmonary artery | 1.78e-15 | 1 |
endocrine cell | 6.53e-15 | 9 |
secretory cell | 7.59e-10 | 36 |
smooth muscle cell of the internal thoracic artery | 2.31e-08 | 2 |
GAG secreting cell | 3.67e-07 | 9 |
carbohydrate secreting cell | 3.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.73e-08 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.15e-08 | 2 |
developing epithelial placode | 2.15e-08 | 2 |
respiratory system arterial blood vessel | 2.15e-08 | 2 |
respiratory system blood vessel | 2.15e-08 | 2 |
respiratory system artery | 2.15e-08 | 2 |
head blood vessel | 2.15e-08 | 2 |
pulmonary artery | 2.15e-08 | 2 |
pulmonary vascular system | 2.15e-08 | 2 |
pharyngeal vasculature | 2.15e-08 | 2 |
truncus arteriosus | 2.15e-08 | 2 |
aortic sac | 2.15e-08 | 2 |
pharyngeal arch artery | 2.15e-08 | 2 |
internal thoracic artery | 2.31e-08 | 2 |
pineal body | 2.87e-08 | 2 |
regional part of epithalamus | 2.87e-08 | 2 |
secretory circumventricular organ | 2.87e-08 | 2 |
circumventricular organ | 2.87e-08 | 2 |
epithalamus | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.29e-08 | 2 |