FFCP PHASE1:Hg19::chr17:79359048..79359058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79359048..79359058,- | |||
|coexpression_cluster_id=C327 | |coexpression_cluster_id=C327 | ||
|description=CAGE_peak_at_chr17:79359048..79359058,- | |description=CAGE_peak_at_chr17:79359048..79359058,- | ||
|id=chr17:79359048..79359058,- | |id=chr17:79359048..79359058,- | ||
|ontology_enrichment_celltype=CL:0000148!3.24e-19!10;CL:0000541!3.24e-19!10;CL:0000147!4.39e-17!14;CL:0002567!4.71e-13!3;CL:0000710!1.67e-11!20;CL:0000075!3.74e-08!27 | |ontology_enrichment_celltype=CL:0000148!3.24e-19!10;CL:0000541!3.24e-19!10;CL:0000147!4.39e-17!14;CL:0002567!4.71e-13!3;CL:0000710!1.67e-11!20;CL:0000075!3.74e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.49e-69;10!CL:0000147;1.82e-49;14!CL:0002567;1.07e-43;3!CL:0000710;1.51e-34;20!CL:0000075;1.67e-25;27!CL:0002077;7.73e-18;34!CL:0002566;8.63e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.76e-69,10;CL:0000541,2.76e-69,10;CL:0000147,1.96e-49,14;CL:0002567,9.28e-44,3;CL:0000710,1.59e-34,20;CL:0000075,1.73e-25,27;CL:0002077,3.68e-20,34;CL:0002566,7.46e-16,1;CL:0000333,7.51e-16,41;CL:0000133,4.97e-11,59;CL:0000221,5.35e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!3.58e-09!2 | |ontology_enrichment_disease=DOID:1909!3.58e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.92e-29;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.92e-29,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002336;2.75e-15;1!UBERON:0011215;2.75e-15;1!UBERON:0001018;2.75e-15;1!UBERON:0002473;2.75e-15;1!UBERON:0005340;2.75e-15;1!UBERON:0003544;2.75e-15;1!UBERON:0005970;2.75e-15;1!UBERON:0002316;2.75e-15;1!UBERON:0001020;2.75e-15;1!UBERON:0002437;2.75e-15;1!UBERON:0001875;2.67e-08;2!UBERON:0005162;2.67e-08;2!UBERON:0000122;2.67e-08;2!UBERON:0006514;2.67e-08;2 | |||
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|short_description=p@chr17:79359048..79359058,- | |short_description=p@chr17:79359048..79359058,- | ||
}} | }} |
Latest revision as of 22:40, 25 July 2015
Short description: | p@chr17:79359048..79359058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79359048..79359058, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.76e-69 | 10 |
melanoblast | 2.76e-69 | 10 |
pigment cell | 1.96e-49 | 14 |
light melanocyte | 9.28e-44 | 3 |
neurecto-epithelial cell | 1.59e-34 | 20 |
columnar/cuboidal epithelial cell | 1.73e-25 | 27 |
ecto-epithelial cell | 3.68e-20 | 34 |
dark melanocyte | 7.46e-16 | 1 |
migratory neural crest cell | 7.51e-16 | 41 |
neurectodermal cell | 4.97e-11 | 59 |
ectodermal cell | 5.35e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.38e-15 | 1 |
central nervous system cell part cluster | 2.38e-15 | 1 |
axon tract | 2.38e-15 | 1 |
intercerebral commissure | 2.38e-15 | 1 |
dorsal telencephalic commissure | 2.38e-15 | 1 |
brain white matter | 2.38e-15 | 1 |
brain commissure | 2.38e-15 | 1 |
white matter | 2.38e-15 | 1 |
nervous system commissure | 2.38e-15 | 1 |
cerebral hemisphere white matter | 2.38e-15 | 1 |
multi cell component structure | 2.48e-08 | 2 |
neuron projection bundle | 2.48e-08 | 2 |
globus pallidus | 2.87e-08 | 2 |
pallidum | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.92e-29 | 2 |