FFCP PHASE1:Hg19::chr17:8397217..8397222,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:8397217..8397222,+ | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr17:8397217..8397222,+ | |description=CAGE_peak_at_chr17:8397217..8397222,+ | ||
|id=chr17:8397217..8397222,+ | |id=chr17:8397217..8397222,+ | ||
|ontology_enrichment_celltype=CL:0000775;5.53e-27;3!CL:0000623;1.12e-26;3!CL:0000094;6.27e-18;8!CL:0000624;4.71e-14;6!CL:0000081;4.22e-13;11!CL:0000791;2.31e-12;18!CL:0000789;2.31e-12;18!CL:0002419;2.31e-12;18!CL:0000226;2.67e-12;3!CL:0000842;2.67e-12;3!CL:0000084;7.51e-09;25!CL:0000542;1.43e-08;53 | |ontology_enrichment_celltype=CL:0000037!3.60e-14!172;CL:0000566!3.60e-14!172;CL:0000738!1.04e-13!140;CL:0000988!2.49e-13!182;CL:0002032!4.91e-12!165;CL:0000837!4.91e-12!165;CL:0002031!8.81e-10!124;CL:0002087!4.48e-09!119;CL:0000624!7.09e-08!6;CL:0000838!7.22e-08!52;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53;CL:0000163!7.07e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000775;5.53e-27;3!CL:0000623;1.12e-26;3!CL:0000094;6.27e-18;8!CL:0000624;4.71e-14;6!CL:0000081;4.22e-13;11!CL:0000791;2.31e-12;18!CL:0000789;2.31e-12;18!CL:0002419;2.31e-12;18!CL:0000226;2.67e-12;3!CL:0000842;2.67e-12;3!CL:0000084;7.51e-09;25!CL:0000542;1.43e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.89e-27,3;CL:0000623,1.22e-26,3;CL:0000825,1.22e-26,3;CL:0000738,5.22e-20,136;CL:0000094,5.05e-18,8;CL:0000037,1.25e-15,168;CL:0000838,2.05e-15,52;CL:0000542,4.28e-15,53;CL:0000051,4.28e-15,53;CL:0000988,1.12e-14,177;CL:0000624,4.72e-14,6;CL:0000081,3.61e-13,11;CL:0002032,8.63e-13,161;CL:0000837,8.63e-13,161;CL:0000226,1.78e-12,3;CL:0000842,1.78e-12,3;CL:0000791,2.37e-12,18;CL:0000789,2.37e-12,18;CL:0002420,2.37e-12,18;CL:0002419,2.37e-12,18;CL:0000790,2.37e-12,18;CL:0002087,2.40e-12,115;CL:0002031,5.10e-10,120;CL:0000084,7.64e-09,25;CL:0000827,7.64e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-12;18!CL:0000051;1.43e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr17:8397217..8397222,+ | |short_description=p@chr17:8397217..8397222,+ | ||
}} | }} |
Latest revision as of 23:22, 25 July 2015
Short description: | p@chr17:8397217..8397222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8397217..8397222, + |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.89e-27 | 3 |
natural killer cell | 1.22e-26 | 3 |
pro-NK cell | 1.22e-26 | 3 |
leukocyte | 5.22e-20 | 136 |
granulocyte | 5.05e-18 | 8 |
hematopoietic stem cell | 1.25e-15 | 168 |
lymphoid lineage restricted progenitor cell | 2.05e-15 | 52 |
lymphocyte | 4.28e-15 | 53 |
common lymphoid progenitor | 4.28e-15 | 53 |
hematopoietic cell | 1.12e-14 | 177 |
CD4-positive, alpha-beta T cell | 4.72e-14 | 6 |
blood cell | 3.61e-13 | 11 |
hematopoietic oligopotent progenitor cell | 8.63e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.63e-13 | 161 |
single nucleate cell | 1.78e-12 | 3 |
mononuclear cell | 1.78e-12 | 3 |
mature alpha-beta T cell | 2.37e-12 | 18 |
alpha-beta T cell | 2.37e-12 | 18 |
immature T cell | 2.37e-12 | 18 |
mature T cell | 2.37e-12 | 18 |
immature alpha-beta T cell | 2.37e-12 | 18 |
nongranular leukocyte | 2.40e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.10e-10 | 120 |
T cell | 7.64e-09 | 25 |
pro-T cell | 7.64e-09 | 25 |