FFCP PHASE1:Hg19::chr19:18319183..18319194,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:18319183..18319194,+ to FFCP PHASE1:Hg19::chr19:18319183..18319194,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18319183..18319194,+ | |||
|description=CAGE_peak_at_chr19:18319183..18319194,+ | |||
|id=chr19:18319183..18319194,+ | |||
|ontology_enrichment_celltype=CL:0000192!7.56e-23!42;CL:0000514!7.56e-23!42;CL:0000055!8.66e-22!180;CL:0000680!1.74e-19!57;CL:0000056!1.74e-19!57;CL:0000355!1.74e-19!57;CL:0000359!2.55e-19!32;CL:0000187!2.68e-19!54;CL:0000183!4.81e-17!59;CL:0000393!1.22e-16!60;CL:0000211!1.22e-16!60;CL:0000057!1.56e-12!75;CL:0002334!1.21e-10!12;CL:0000048!3.38e-10!430;CL:1000306!5.57e-10!4;CL:0002547!5.57e-10!4;CL:0000723!8.24e-10!436;CL:0000222!2.03e-09!119;CL:0000034!2.59e-09!444;CL:0002592!4.21e-08!3;CL:0002622!7.79e-08!3;CL:0002582!1.33e-07!3;CL:0002620!2.02e-07!23;CL:0002579!3.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.07e-26;32!CL:1000306;5.86e-21;4!CL:0002547;5.86e-21;4!CL:0000192;6.50e-18;43!CL:0002595;3.32e-17;5!CL:0002539;6.69e-15;10!CL:0002592;2.88e-13;3!CL:0002622;6.96e-13;3!CL:0000187;2.40e-11;55!CL:0000393;1.91e-08;61!CL:0000211;1.91e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.07e-27,32;CL:0000192,5.38e-24,43;CL:0000514,5.38e-24,43;CL:1000306,5.30e-21,4;CL:0002547,5.30e-21,4;CL:0000187,2.16e-18,55;CL:0002595,2.08e-17,5;CL:0000680,2.36e-17,58;CL:0000056,2.36e-17,58;CL:0000355,2.36e-17,58;CL:0000393,2.05e-16,61;CL:0000211,2.05e-16,61;CL:0002539,7.46e-15,10;CL:0002592,3.79e-13,3;CL:0002622,8.35e-13,3;CL:0000222,2.05e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;6.50e-18;43!CL:0000355;1.30e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.21e-19!42;UBERON:0003509!2.21e-19!42;UBERON:0004572!2.21e-19!42;UBERON:0004573!3.13e-19!33;UBERON:0004571!3.13e-19!33;UBERON:0001134!1.04e-17!61;UBERON:0002036!1.04e-17!61;UBERON:0003082!1.04e-17!61;UBERON:0002385!6.55e-17!63;UBERON:0001015!6.55e-17!63;UBERON:0000383!6.55e-17!63;UBERON:0004290!9.76e-16!70;UBERON:0000486!9.02e-15!82;UBERON:0001981!1.91e-14!60;UBERON:0007500!1.91e-14!60;UBERON:0004537!1.91e-14!60;UBERON:0006965!1.91e-14!60;UBERON:0000914!2.02e-14!83;UBERON:0002329!2.02e-14!83;UBERON:0003077!2.02e-14!83;UBERON:0003059!2.02e-14!83;UBERON:0007282!2.02e-14!83;UBERON:0009618!2.02e-14!83;UBERON:0007285!2.02e-14!83;UBERON:0004872!8.70e-14!84;UBERON:0000055!1.03e-11!69;UBERON:0004457!2.19e-10!12;UBERON:0000042!2.19e-10!12;UBERON:0000490!3.42e-10!138;UBERON:0005256!3.57e-10!143;UBERON:0000415!5.57e-10!4;UBERON:0007240!5.57e-10!4;UBERON:0005742!5.57e-10!4;UBERON:0005734!5.57e-10!4;UBERON:0004664!5.57e-10!4;UBERON:0004663!5.57e-10!4;UBERON:0002100!1.26e-09!216;UBERON:0002049!1.93e-09!79;UBERON:0007798!1.93e-09!79;UBERON:0003914!3.45e-09!118;UBERON:0001621!4.21e-08!3;UBERON:0000947!1.16e-07!21;UBERON:0010191!1.16e-07!21;UBERON:0004535!3.63e-07!110;UBERON:0001009!8.26e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.93e-39;33!UBERON:0004571;3.93e-39;33!UBERON:0001637;1.14e-24;42!UBERON:0003509;1.14e-24;42!UBERON:0004572;1.14e-24;42!UBERON:0004797;5.86e-21;4!UBERON:0000415;5.86e-21;4!UBERON:0007240;5.86e-21;4!UBERON:0005742;5.86e-21;4!UBERON:0005734;5.86e-21;4!UBERON:0004664;5.86e-21;4!UBERON:0004663;5.86e-21;4!UBERON:0000947;1.62e-20;21!UBERON:0010191;1.62e-20;21!UBERON:0003834;3.32e-17;5!UBERON:0001533;3.32e-17;5!UBERON:0004237;6.69e-15;10!UBERON:0004695;6.69e-15;10!UBERON:0002111;6.69e-15;10!UBERON:0004178;6.69e-15;10!UBERON:0003498;2.88e-13;3!UBERON:0005985;2.88e-13;3!UBERON:0001621;2.88e-13;3!UBERON:0003513;1.87e-12;7!UBERON:0007500;3.78e-11;56!UBERON:0001981;3.78e-11;56!UBERON:0004537;3.78e-11;56!UBERON:0001135;5.32e-10;15!UBERON:0000055;1.87e-09;65!UBERON:0003914;1.18e-08;74!UBERON:0002049;2.15e-08;75!UBERON:0007798;2.15e-08;75!UBERON:0002367;7.11e-08;11!UBERON:0010147;7.11e-08;11!UBERON:0003937;2.94e-07;12!UBERON:0005399;2.94e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.53e-44,33;UBERON:0004571,1.53e-44,33;UBERON:0001637,1.44e-34,42;UBERON:0003509,1.44e-34,42;UBERON:0004572,1.44e-34,42;UBERON:0007500,5.14e-24,59;UBERON:0001981,5.14e-24,59;UBERON:0004537,5.14e-24,59;UBERON:0006965,5.14e-24,59;UBERON:0000415,5.30e-21,4;UBERON:0007240,5.30e-21,4;UBERON:0005742,5.30e-21,4;UBERON:0005734,5.30e-21,4;UBERON:0004664,5.30e-21,4;UBERON:0004663,5.30e-21,4;UBERON:0000055,1.47e-20,68;UBERON:0000947,1.69e-20,21;UBERON:0010191,1.69e-20,21;UBERON:0002049,1.18e-17,78;UBERON:0007798,1.18e-17,78;UBERON:0003834,2.08e-17,5;UBERON:0001533,2.08e-17,5;UBERON:0004872,1.84e-16,83;UBERON:0001134,4.01e-16,62;UBERON:0002036,4.01e-16,62;UBERON:0003082,4.01e-16,62;UBERON:0002385,1.45e-15,64;UBERON:0001015,1.45e-15,64;UBERON:0000383,1.45e-15,64;UBERON:0004237,7.46e-15,10;UBERON:0004695,7.46e-15,10;UBERON:0002111,7.46e-15,10;UBERON:0004178,7.46e-15,10;UBERON:0002329,7.33e-14,71;UBERON:0003059,7.33e-14,71;UBERON:0007282,7.33e-14,71;UBERON:0004290,7.33e-14,71;UBERON:0009618,7.33e-14,71;UBERON:0003077,1.21e-13,72;UBERON:0007285,1.21e-13,72;UBERON:0007524,1.96e-13,73;UBERON:0001621,3.79e-13,3;UBERON:0003513,1.34e-12,7;UBERON:0007503,1.84e-12,78;UBERON:0004797,2.92e-12,7;UBERON:0004535,5.05e-12,109;UBERON:0001009,1.21e-11,112;UBERON:0000486,1.32e-11,83;UBERON:0003914,4.72e-11,117;UBERON:0005256,1.83e-10,122;UBERON:0001135,5.72e-10,15;UBERON:0000490,3.03e-08,148;UBERON:0003498,3.05e-08,5;UBERON:0005985,3.05e-08,5;UBERON:0002367,7.29e-08,11;UBERON:0010147,7.29e-08,11;UBERON:0009846,7.29e-08,11;UBERON:0003353,7.29e-08,11;UBERON:0004902,7.29e-08,11;UBERON:0003820,7.29e-08,11;UBERON:0009847,7.29e-08,11;UBERON:0003104,1.83e-07,160;UBERON:0009142,1.83e-07,160;UBERON:0000926,2.30e-07,315;UBERON:0004120,2.30e-07,315;UBERON:0006603,2.30e-07,315;UBERON:0003937,3.01e-07,12;UBERON:0005399,3.01e-07,12;UBERON:0004111,5.42e-07,240 | |||
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|short_description=p@chr19:18319183..18319194,+ | |||
}} | }} |
Latest revision as of 05:06, 26 July 2015
Short description: | p@chr19:18319183..18319194, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18319183..18319194, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.07e-27 | 32 |
smooth muscle cell | 5.38e-24 | 43 |
smooth muscle myoblast | 5.38e-24 | 43 |
fibroblast of tunica adventitia of artery | 5.30e-21 | 4 |
fibroblast of the aortic adventitia | 5.30e-21 | 4 |
muscle cell | 2.16e-18 | 55 |
smooth muscle cell of the subclavian artery | 2.08e-17 | 5 |
muscle precursor cell | 2.36e-17 | 58 |
myoblast | 2.36e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-17 | 58 |
electrically responsive cell | 2.05e-16 | 61 |
electrically active cell | 2.05e-16 | 61 |
aortic smooth muscle cell | 7.46e-15 | 10 |
smooth muscle cell of the coronary artery | 3.79e-13 | 3 |
prostate stromal cell | 8.35e-13 | 3 |
mesodermal cell | 2.05e-07 | 121 |