FFCP PHASE1:Hg19::chr19:3478477..3478500,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:3478477..3478500,- | |||
|coexpression_cluster_id=C1452 | |||
|description=CAGE_peak_at_chr19:3478477..3478500,- | |||
|id=chr19:3478477..3478500,- | |||
|ontology_enrichment_celltype=CL:0000763!2.54e-13!112;CL:0000049!2.54e-13!112;CL:0000037!2.99e-12!172;CL:0000566!2.99e-12!172;CL:0000988!5.28e-11!182;CL:0002032!6.48e-10!165;CL:0000837!6.48e-10!165;CL:0002322!4.56e-08!5;CL:0000767!1.41e-07!3;CL:0000094!2.63e-07!8;CL:0000842!5.87e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000763;8.06e-09;100!CL:0000037;2.70e-08;1!CL:0001024;2.70e-08;1!CL:0002032;6.52e-08;1!CL:0000557;6.52e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.74e-20,108;CL:0000049,8.74e-20,108;CL:0000037,1.99e-17,168;CL:0002032,1.44e-16,161;CL:0000837,1.44e-16,161;CL:0000988,2.60e-16,177;CL:0001024,2.70e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000049;5.26e-09;108 | |||
|ontology_enrichment_disease=DOID:1240!2.28e-28!39;DOID:8692!3.68e-25!31;DOID:2531!4.75e-20!51;DOID:0060083!4.75e-20!51;DOID:1036!6.27e-11!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.43e-56;31!DOID:1240;1.13e-52;39!DOID:2531;1.19e-34;51!DOID:0060083;1.19e-34;51!DOID:1036;8.48e-28;8!DOID:9119;2.89e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.92e-62,39;DOID:8692,4.52e-57,31;DOID:2531,1.62e-46,51;DOID:0060083,1.62e-46,51;DOID:1036,9.79e-28,8;DOID:0050686,1.13e-14,137;DOID:9119,2.89e-08,1;DOID:162,6.25e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.19e-13;2!UBERON:0005058;1.19e-13;2!UBERON:0009113;1.19e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.23e-07,4;UBERON:0005058,3.23e-07,4;UBERON:0009113,3.23e-07,4;UBERON:0003295,3.23e-07,4;UBERON:0005562,3.23e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.154816123316076,0,0,0,0,0,268.644401991385,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,158.605594294831,102.01255846264,106.143786164356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,1.74290914304278,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,1.13826949357463,1.4348364545594,61.8696051441731,129.45763020948,23.7074412650749,22.0742919386698,56.1594356226918,8.44468312422811,1.09675927041116,47.6205506471128,9.14175600128658,0.321176150207399,0,0,2.74804275804612,0,0,0,0.781552381608161,0,0,0,161.206832510945,33.8368812210839,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,9.57579564009651,0,2.03036094555463,1.37243774022418,1.1747511088309,0,1.43042921082341,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,12.7746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9520214853171,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0.773494655682926,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.639701945702943,0,3.1648565819643,1.11734485732544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:3478477..3478500,- | |||
}} |
Latest revision as of 06:22, 26 July 2015
Short description: | p@chr19:3478477..3478500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3478477..3478500, - |
Coexpression cluster: | C1452_CD133_CD34_acute_chronic_non_thymus_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.74e-20 | 108 |
common myeloid progenitor | 8.74e-20 | 108 |
hematopoietic stem cell | 1.99e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.44e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-16 | 161 |
hematopoietic cell | 2.60e-16 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.70e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.23e-07 | 4 |
hemolymphoid system gland | 3.23e-07 | 4 |
thymic region | 3.23e-07 | 4 |
pharyngeal gland | 3.23e-07 | 4 |
thymus primordium | 3.23e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.92e-62 | 39 |
myeloid leukemia | 4.52e-57 | 31 |
hematologic cancer | 1.62e-46 | 51 |
immune system cancer | 1.62e-46 | 51 |
chronic leukemia | 9.79e-28 | 8 |
organ system cancer | 1.13e-14 | 137 |
acute myeloid leukemia | 2.89e-08 | 1 |
cancer | 6.25e-07 | 235 |