FFCP PHASE1:Hg19::chr19:3546150..3546160,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:3546150..3546160,-
|short_description=p@chr19:3546150..3546160,-
|description=CAGE_peak_at_chr19:3546150..3546160,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:3546150..3546160,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr19:3546150..3546160,- | |||
|id=chr19:3546150..3546160,- | |||
|ontology_enrichment_celltype=CL:0000148!1.56e-12!10;CL:0000541!1.56e-12!10;CL:0000710!8.88e-11!20;CL:0002077!1.91e-09!33;CL:0002567!4.97e-09!3;CL:0000147!1.45e-08!14;CL:0000075!2.12e-07!27;CL:0002150!2.67e-07!3;CL:0000861!2.67e-07!3;CL:0000451!3.11e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002567;5.41e-85;3!CL:0000148;1.54e-70;10!CL:0000147;1.37e-50;14!CL:0000710;1.33e-35;20!CL:0002591;2.73e-29;1!CL:0000075;1.62e-26;27!CL:0002077;2.71e-18;34!CL:0000149;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.41e-85,3;CL:0000148,1.16e-70,10;CL:0000541,1.16e-70,10;CL:0000147,1.12e-50,14;CL:0000710,1.15e-35,20;CL:0002591,3.16e-29,1;CL:0000075,1.45e-26,27;CL:0002077,3.37e-21,34;CL:0000333,7.42e-17,41;CL:0000133,5.40e-12,59;CL:0000221,6.07e-10,72;CL:0000149,2.11e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.50e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!3.62e-16!9;UBERON:0001557!8.01e-09!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.21e-15;2!UBERON:0002012;2.21e-15;2!UBERON:0008886;2.21e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.37e-15,2;UBERON:0007497,2.37e-15,2;UBERON:0003643,2.37e-15,2;UBERON:0003504,2.37e-15,2;UBERON:0003469,2.37e-15,2;UBERON:0003496,2.37e-15,2;UBERON:0002012,2.37e-15,2;UBERON:0008886,2.37e-15,2;UBERON:0007303,2.37e-15,2;UBERON:0002061,2.37e-15,2;UBERON:0005432,2.37e-15,2;UBERON:0004363,2.37e-15,2;UBERON:0004145,1.09e-10,3;UBERON:0003498,6.39e-07,5;UBERON:0005985,6.39e-07,5 | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.441175890929576,0.653638332277218,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.380987365753014,2.29193055334967,1.17217447210047,5.13217338068116,2.77634230298973,1.20137223137567,0.571652865261156,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:3546150..3546160,- | |||
}} | }} |
Latest revision as of 06:27, 26 July 2015
Short description: | p@chr19:3546150..3546160, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3546150..3546160, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.41e-85 | 3 |
melanocyte | 1.16e-70 | 10 |
melanoblast | 1.16e-70 | 10 |
pigment cell | 1.12e-50 | 14 |
neurecto-epithelial cell | 1.15e-35 | 20 |
smooth muscle cell of the pulmonary artery | 3.16e-29 | 1 |
columnar/cuboidal epithelial cell | 1.45e-26 | 27 |
ecto-epithelial cell | 3.37e-21 | 34 |
migratory neural crest cell | 7.42e-17 | 41 |
neurectodermal cell | 5.40e-12 | 59 |
ectodermal cell | 6.07e-10 | 72 |
visual pigment cell | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.37e-15 | 2 |
developing epithelial placode | 2.37e-15 | 2 |
respiratory system arterial blood vessel | 2.37e-15 | 2 |
respiratory system blood vessel | 2.37e-15 | 2 |
respiratory system artery | 2.37e-15 | 2 |
head blood vessel | 2.37e-15 | 2 |
pulmonary artery | 2.37e-15 | 2 |
pulmonary vascular system | 2.37e-15 | 2 |
pharyngeal vasculature | 2.37e-15 | 2 |
truncus arteriosus | 2.37e-15 | 2 |
aortic sac | 2.37e-15 | 2 |
pharyngeal arch artery | 2.37e-15 | 2 |
outflow tract | 1.09e-10 | 3 |
heart blood vessel | 6.39e-07 | 5 |
coronary vessel | 6.39e-07 | 5 |