FFCP PHASE1:Hg19::chr19:36245962..36245977,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36245962..36245977,+ to FFCP PHASE1:Hg19::chr19:36245962..36245977,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:36245962..36245977,+ | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_at_chr19:36245962..36245977,+ | |||
|id=chr19:36245962..36245977,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.07e-23!180;CL:0000187!8.43e-17!54;CL:0000680!1.24e-16!57;CL:0000056!1.24e-16!57;CL:0000355!1.24e-16!57;CL:0000183!9.63e-16!59;CL:0000192!1.34e-15!42;CL:0000514!1.34e-15!42;CL:0000057!4.53e-15!75;CL:0000393!1.53e-13!60;CL:0000211!1.53e-13!60;CL:0000136!4.07e-10!15;CL:0000359!2.60e-09!32;CL:0000048!1.29e-07!430;CL:0002334!2.38e-07!12;CL:0000723!5.57e-07!436;CL:0002570!6.96e-07!8;CL:0002539!8.94e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.82e-12;13!CL:0002334;1.20e-08;12!CL:0000192;3.35e-08;43!CL:0002570;8.34e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.22e-15,15;CL:0000192,5.66e-11,43;CL:0000514,5.66e-11,43;CL:0000187,3.93e-09,55;CL:0002334,1.10e-08,12;CL:0000057,1.65e-08,76;CL:0000680,2.43e-08,58;CL:0000056,2.43e-08,58;CL:0000355,2.43e-08,58;CL:0000393,1.24e-07,61;CL:0000211,1.24e-07,61;CL:0000048,5.67e-07,427;CL:0002570,6.74e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;3.35e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.23e-20!63;UBERON:0001015!1.23e-20!63;UBERON:0000383!1.23e-20!63;UBERON:0001134!1.56e-19!61;UBERON:0002036!1.56e-19!61;UBERON:0003082!1.56e-19!61;UBERON:0004290!2.02e-18!70;UBERON:0000914!1.22e-17!83;UBERON:0002329!1.22e-17!83;UBERON:0003077!1.22e-17!83;UBERON:0003059!1.22e-17!83;UBERON:0007282!1.22e-17!83;UBERON:0009618!1.22e-17!83;UBERON:0007285!1.22e-17!83;UBERON:0000486!7.77e-15!82;UBERON:0005256!2.42e-12!143;UBERON:0000475!7.14e-12!365;UBERON:0001013!4.98e-11!14;UBERON:0001135!1.01e-09!15;UBERON:0000479!2.64e-09!787;UBERON:0004872!3.68e-08!84;UBERON:0002100!7.09e-08!216;UBERON:0000481!1.01e-07!347;UBERON:0002049!1.12e-07!79;UBERON:0007798!1.12e-07!79;UBERON:0004573!1.61e-07!33;UBERON:0004571!1.61e-07!33;UBERON:0001009!1.98e-07!113;UBERON:0000490!2.40e-07!138;UBERON:0004237!8.94e-07!10;UBERON:0004695!8.94e-07!10;UBERON:0002111!8.94e-07!10;UBERON:0004178!8.94e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.73e-14;14!UBERON:0004457;7.83e-11;9!UBERON:0000042;7.83e-11;9!UBERON:0003688;4.45e-10;6!UBERON:0002358;4.45e-10;6!UBERON:0003684;4.45e-10;6!UBERON:0001178;4.45e-10;6!UBERON:0004905;1.96e-08;8!UBERON:0000982;1.96e-08;8!UBERON:0004770;1.96e-08;8!UBERON:0011135;1.86e-07;5!UBERON:0002216;1.86e-07;5!UBERON:0011134;1.86e-07;5!UBERON:0002209;1.86e-07;5!UBERON:0002213;1.86e-07;5!UBERON:0007844;1.86e-07;5!UBERON:0011138;1.86e-07;5!UBERON:0001130;1.86e-07;5!UBERON:0001066;1.86e-07;5!UBERON:0001468;1.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.56e-14,14;UBERON:0002385,4.50e-12,64;UBERON:0001015,4.50e-12,64;UBERON:0000383,4.50e-12,64;UBERON:0001134,1.54e-11,62;UBERON:0002036,1.54e-11,62;UBERON:0003082,1.54e-11,62;UBERON:0007524,3.10e-11,73;UBERON:0002329,6.02e-11,71;UBERON:0003059,6.02e-11,71;UBERON:0007282,6.02e-11,71;UBERON:0004290,6.02e-11,71;UBERON:0009618,6.02e-11,71;UBERON:0003104,1.05e-10,160;UBERON:0009142,1.05e-10,160;UBERON:0003077,1.11e-10,72;UBERON:0007285,1.11e-10,72;UBERON:0005256,1.44e-10,122;UBERON:0003688,4.78e-10,6;UBERON:0002358,4.78e-10,6;UBERON:0003684,4.78e-10,6;UBERON:0001178,4.78e-10,6;UBERON:0000486,7.28e-10,83;UBERON:0000926,1.12e-09,315;UBERON:0004120,1.12e-09,315;UBERON:0006603,1.12e-09,315;UBERON:0007503,3.05e-09,78;UBERON:0004905,1.51e-08,8;UBERON:0000982,1.51e-08,8;UBERON:0004770,1.51e-08,8;UBERON:0004457,9.35e-08,12;UBERON:0000042,9.35e-08,12;UBERON:0011135,1.94e-07,5;UBERON:0002216,1.94e-07,5;UBERON:0011134,1.94e-07,5;UBERON:0002209,1.94e-07,5;UBERON:0002213,1.94e-07,5;UBERON:0005856,1.94e-07,5;UBERON:0005866,1.94e-07,5;UBERON:0005863,1.94e-07,5;UBERON:0007844,1.94e-07,5;UBERON:0011138,1.94e-07,5;UBERON:0001130,1.94e-07,5;UBERON:0001066,1.94e-07,5;UBERON:0001468,1.94e-07,5;UBERON:0002100,2.72e-07,199 | |||
|phase1_expression=1.99846217197612,2.78330681058278,5.92008497203079,2.00146596706261,12.9618717383913,1.74467704820074,2.53299878168311,1.26343974685366,12.5369101535922,0,0,0,0,1.11389717664042,1.65698687863958,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,1.22400414746552,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,2.1686349143074,0,2.31754430337318,0,0.973269740605272,0.0945348171640679,0.221729397462564,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,2.98183171017191,1.8994576749687,1.58891016975863,1.43418310374407,3.19201543978521,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.605429710579726,0.576175924479999,0,1.87296046098192,0,2.54062756938062,0.469737994575059,0,0.280901613404497,0.61246251376468,0.368502951935304,0.723280468230358,0,0.494533858557114,1.82032272387605,3.59309070908119,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.453728732640084,0.179389635688862,0,0.211931901159562,0,1.54578793857658,0.515281080091258,0.558350568994769,0.168776332241266,1.07180705677318,0.504867548488229,0.736399189138395,1.77810662500693,1.42003837006646,1.5112814734146,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,3.71494342425583,8.66255378003503,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,5.88034845542168,0,0,0,0,0,0.514703430895577,0,0,0,0,0.651616610620649,2.07986957055916,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.448524337381443,0.43596006883328,0.22001485746285,0.387815147273333,21.4593867511129,0.845302752556,1.32969058292435,7.28052058379563,1.02882949704857,0,1.5985330740966,9.57952557509589,20.6196210048748,0,0.977208552881205,12.0833262572466,2.37585561880029,0,0,0,0,0,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94459580125936,2.00068208423871,3.52644530809656,0.207970861530807,0,0,0,0,0,1.03473071292505,1.32845119707087,0.184369168541703,1.47702144595741,0.979005787313703,0,0,0,0,0,0,0.30239029332968,1.48864684691266,0.920771839728375,1.40330047216537,5.12556597022804,1.53512174720011,4.82561763430822,4.45254199334973,0.616838775210622,1.59805552781814,1.14978018419333,0,2.67283870457906,0,0,0,0.803701137152247,1.45672934405374,3.14698595902618,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,0,0,3.21367859688319,2.12675580242668,0.308097234229289,0.307007349452259,0.137836572484531,0.429680979473094,1.74020032697074,0.170453254832202,0.890320356467374,0,0,0,0,6.97268323945929,3.46293581513704,0.6970372701606,0.924100740528266,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0.632758849437452,1.5250415513906,4.86205803491534,3.42351190427136,1.27281299170375,0,1.97859703341646,3.0199073270966,0.942499218765491,0.404364963146632,1.58510321173008,0,1.46290121726877,0.974853958525138,1.05650146756755,2.04749867111979,2.82810863907426,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,3.47265320560013,8.52663177660623,0.202910376962704,0.6196469961995,0,3.29846110069318,3.34046739444612,0,2.48332744849418,3.79993743535795,1.64647446479951,0.379473173765715,2.0996083214699,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.31857361344705,0,0,0,0,0.593929361665277,0.614321404198464,0,0.140669416410513,0,0,0,3.58646378851925,0,0,0,0,0,0,0,0,3.25523238601881,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.692552326534174,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0.202203398942031,5.61804353109152,0.468528891450678,0,0,0,1.57833761139756,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,2.40780445460263,0,0,0,0.678923115418936,0,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.410716136675979,0,0,0,0.558564802544508,1.83328339209347,0,6.19004901546872,9.87219910714113,0.669514372325618,1.00775208730089,4.32359860250884,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,2.1440859791201,1.98627591109629,0,4.88699641578341,4.32110745600634,9.14444608306346,0,0,1.87426823963964,0.226624183040251,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,2.0055191521816,1.22538230705385,0.983617892129413,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,1.49254802886874,2.57084640831947,5.54805861502613,2.08343305802598,0.251567901752575,0,2.51724075236616,3.93200401784422,1.24349760466224,0.29571029997926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| ||
|short_description=p@chr19:36245962..36245977,+ | |||
}} | }} |
Latest revision as of 06:50, 26 July 2015
Short description: | p@chr19:36245962..36245977, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36245962..36245977, + |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.22e-15 | 15 |
smooth muscle cell | 5.66e-11 | 43 |
smooth muscle myoblast | 5.66e-11 | 43 |
muscle cell | 3.93e-09 | 55 |
preadipocyte | 1.10e-08 | 12 |
fibroblast | 1.65e-08 | 76 |
muscle precursor cell | 2.43e-08 | 58 |
myoblast | 2.43e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-08 | 58 |
electrically responsive cell | 1.24e-07 | 61 |
electrically active cell | 1.24e-07 | 61 |
multi fate stem cell | 5.67e-07 | 427 |
mesenchymal stem cell of adipose | 6.74e-07 | 8 |