FFCP PHASE1:Hg19::chr19:51517875..51517889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-265bp_to_AK026045_5end | |association_with_transcript=-265bp_to_AK026045_5end | ||
|cluster_id=chr19:51517875..51517889,- | |||
|coexpression_cluster_id=C2501 | |coexpression_cluster_id=C2501 | ||
|description=CAGE_peak_3_at_AK026045_5end | |description=CAGE_peak_3_at_AK026045_5end | ||
|id=chr19:51517875..51517889,- | |id=chr19:51517875..51517889,- | ||
|ontology_enrichment_celltype=CL:0002076!3.03e-11!43;CL:0002251!3.72e-10!21;CL:0000223!3.70e-09!59;CL:0000076!1.15e-08!62;CL:0000066!1.21e-08!254 | |ontology_enrichment_celltype=CL:0002076!3.03e-11!43;CL:0002251!3.72e-10!21;CL:0000223!3.70e-09!59;CL:0000076!1.15e-08!62;CL:0000066!1.21e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002231;2.62e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.62e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.32e-15!14;DOID:305!5.95e-08!106 | |ontology_enrichment_disease=DOID:1749!1.32e-15!14;DOID:305!5.95e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.34e-66;1!DOID:3149;3.34e-66;1!DOID:3451;5.96e-34;2!DOID:4159;5.96e-34;2!DOID:0060122;5.96e-34;2!DOID:4362;1.71e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.66e-66,1;DOID:3149,4.66e-66,1;DOID:3451,7.05e-34,2;DOID:4159,7.05e-34,2;DOID:0060122,7.05e-34,2;DOID:4362,1.60e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003343!5.43e-19!4;UBERON:0004785!5.43e-19!4;UBERON:0000166!3.45e-17!21;UBERON:0001723!1.96e-15!3;UBERON:0001033!1.96e-15!3;UBERON:0010056!1.96e-15!3;UBERON:0003729!3.12e-15!5;UBERON:0000165!1.70e-12!28;UBERON:0000930!1.70e-12!28;UBERON:0000161!4.19e-12!35;UBERON:0000974!8.50e-12!10;UBERON:0000344!1.05e-09!12;UBERON:0001004!1.80e-08!72;UBERON:0001444!2.93e-08!48;UBERON:0003102!4.24e-07!95 | |ontology_enrichment_uberon=UBERON:0003343!5.43e-19!4;UBERON:0004785!5.43e-19!4;UBERON:0000166!3.45e-17!21;UBERON:0001723!1.96e-15!3;UBERON:0001033!1.96e-15!3;UBERON:0010056!1.96e-15!3;UBERON:0003729!3.12e-15!5;UBERON:0000165!1.70e-12!28;UBERON:0000930!1.70e-12!28;UBERON:0000161!4.19e-12!35;UBERON:0000974!8.50e-12!10;UBERON:0000344!1.05e-09!12;UBERON:0001004!1.80e-08!72;UBERON:0001444!2.93e-08!48;UBERON:0003102!4.24e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;9.45e-18;4!UBERON:0000002;2.59e-12;6!UBERON:0001560;2.59e-12;6!UBERON:0002367;2.32e-07;11!UBERON:0010147;2.32e-07;11!UBERON:0003937;7.48e-07;12!UBERON:0005399;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.03e-17,4;UBERON:0000002,2.45e-12,6;UBERON:0001560,2.45e-12,6;UBERON:0002367,2.32e-07,11;UBERON:0010147,2.32e-07,11;UBERON:0009846,2.32e-07,11;UBERON:0003353,2.32e-07,11;UBERON:0004902,2.32e-07,11;UBERON:0003820,2.32e-07,11;UBERON:0009847,2.32e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12 | |||
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|short_description=p3@AK026045 | |short_description=p3@AK026045 | ||
}} | }} |
Latest revision as of 16:36, 27 July 2015
Short description: | p3@AK026045 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK026045_5end |
Coexpression cluster: | C2501_Prostate_tongue_keratoacanthoma_cervical_papillotubular_throat_oral |
Association with transcript: | -265bp_to_AK026045_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.03e-17 | 4 |
uterine cervix | 2.45e-12 | 6 |
neck of organ | 2.45e-12 | 6 |
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.66e-66 | 1 |
keratoacanthoma | 4.66e-66 | 1 |
skin carcinoma | 7.05e-34 | 2 |
skin cancer | 7.05e-34 | 2 |
integumentary system cancer | 7.05e-34 | 2 |
cervical cancer | 1.60e-14 | 5 |