FFCP PHASE1:Hg19::chr19:5244491..5244502,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:5244491..5244502,- to FFCP PHASE1:Hg19::chr19:5244491..5244502,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:5244491..5244502,- | |||
|description=CAGE_peak_at_chr19:5244491..5244502,- | |||
|id=chr19:5244491..5244502,- | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-07!6;CL:0000031!1.51e-07!6;CL:0000404!1.51e-07!6;CL:0000047!6.53e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.63e-25;6!CL:0000404;2.63e-25;6!CL:0002591;8.01e-18;1!CL:0002521;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-25,6;CL:0000031,1.67e-25,6;CL:0000404,1.67e-25,6;CL:0000047,2.57e-19,8;CL:0002591,1.03e-17,1 | |||
|ontology_enrichment_development_v019=CL:0000031;2.63e-25;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.30e-12!82;UBERON:0005743!3.23e-11!86;UBERON:0000073!4.76e-10!94;UBERON:0001016!4.76e-10!94;UBERON:0001049!5.37e-09!57;UBERON:0005068!5.37e-09!57;UBERON:0006241!5.37e-09!57;UBERON:0007135!5.37e-09!57;UBERON:0007023!6.33e-09!115;UBERON:0000955!3.08e-08!69;UBERON:0006238!3.08e-08!69;UBERON:0000924!8.22e-08!173;UBERON:0006601!8.22e-08!173;UBERON:0002616!1.37e-07!59;UBERON:0004121!2.49e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;8.32e-10;2!UBERON:0000078;1.38e-09;2!UBERON:0002012;1.38e-09;2!UBERON:0008886;1.38e-09;2!UBERON:0002190;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,7.98e-10,2;UBERON:0000078,1.57e-09,2;UBERON:0007497,1.57e-09,2;UBERON:0003643,1.57e-09,2;UBERON:0003504,1.57e-09,2;UBERON:0003469,1.57e-09,2;UBERON:0003496,1.57e-09,2;UBERON:0002012,1.57e-09,2;UBERON:0008886,1.57e-09,2;UBERON:0007303,1.57e-09,2;UBERON:0002061,1.57e-09,2;UBERON:0005432,1.57e-09,2;UBERON:0004363,1.57e-09,2;UBERON:0001017,4.80e-07,81;UBERON:0004145,9.12e-07,3 | |||
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| ||
|short_description=p@chr19:5244491..5244502,- | |||
}} | }} |
Latest revision as of 16:50, 27 July 2015
Short description: | p@chr19:5244491..5244502, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5244491..5244502, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.67e-25 | 6 |
neuroblast | 1.67e-25 | 6 |
electrically signaling cell | 1.67e-25 | 6 |
neuronal stem cell | 2.57e-19 | 8 |
smooth muscle cell of the pulmonary artery | 1.03e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 7.98e-10 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.57e-09 | 2 |
developing epithelial placode | 1.57e-09 | 2 |
respiratory system arterial blood vessel | 1.57e-09 | 2 |
respiratory system blood vessel | 1.57e-09 | 2 |
respiratory system artery | 1.57e-09 | 2 |
head blood vessel | 1.57e-09 | 2 |
pulmonary artery | 1.57e-09 | 2 |
pulmonary vascular system | 1.57e-09 | 2 |
pharyngeal vasculature | 1.57e-09 | 2 |
truncus arteriosus | 1.57e-09 | 2 |
aortic sac | 1.57e-09 | 2 |
pharyngeal arch artery | 1.57e-09 | 2 |
central nervous system | 4.80e-07 | 81 |
outflow tract | 9.12e-07 | 3 |