FFCP PHASE1:Hg19::chr19:681941..681952,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:681941..681952,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr19:681941..681952,+ | |||
|id=chr19:681941..681952,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.75e-08!3;CL:0002579!2.58e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.71e-66;3!CL:0002616;3.99e-50;1!CL:0002591;6.58e-50;1!CL:0000349;1.55e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.71e-66,3;CL:0002616,3.99e-50,1;CL:0002591,6.58e-50,1;CL:0000349,1.55e-11,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!1.17e-10!24;UBERON:0005631!2.70e-09!14;UBERON:0000158!2.70e-09!14;UBERON:0000476!3.75e-08!3;UBERON:0000920!3.75e-08!3;UBERON:0003124!4.20e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.71e-66;3!UBERON:0000920;1.71e-66;3!UBERON:0005406;7.14e-26;2!UBERON:0000078;9.18e-26;2!UBERON:0002012;9.18e-26;2!UBERON:0008886;9.18e-26;2!UBERON:0005631;6.99e-21;10!UBERON:0000158;6.99e-21;10!UBERON:0000478;2.35e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.71e-66,3;UBERON:0003124,2.74e-29,7;UBERON:0005406,7.14e-26,2;UBERON:0000078,9.18e-26,2;UBERON:0007497,9.18e-26,2;UBERON:0003643,9.18e-26,2;UBERON:0003504,9.18e-26,2;UBERON:0003469,9.18e-26,2;UBERON:0003496,9.18e-26,2;UBERON:0002012,9.18e-26,2;UBERON:0008886,9.18e-26,2;UBERON:0007303,9.18e-26,2;UBERON:0002061,9.18e-26,2;UBERON:0005432,9.18e-26,2;UBERON:0004363,9.18e-26,2;UBERON:0004145,1.12e-17,3;UBERON:0005631,2.95e-15,14;UBERON:0000158,2.95e-15,14;UBERON:0003498,3.60e-11,5;UBERON:0005985,3.60e-11,5;UBERON:0010188,1.57e-09,6;UBERON:0002539,1.57e-09,6;UBERON:0003351,1.57e-09,6;UBERON:0008816,1.57e-09,6;UBERON:0000478,2.35e-09,24;UBERON:0000485,8.85e-07,9 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,3.48935409640147,0,0,0,0,0,0.436882744260345,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0,0.280660094433074,0.512556597022804,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.269272933229316,0,7.97502899329799,0.641183153813036,12.7928346244472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494255755786011,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:681941..681952,+ | |||
}} |
Latest revision as of 18:21, 27 July 2015
Short description: | p@chr19:681941..681952, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:681941..681952, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.71e-66 | 3 |
perirenal adipocyte cell | 3.99e-50 | 1 |
smooth muscle cell of the pulmonary artery | 6.58e-50 | 1 |
extraembryonic cell | 1.55e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.71e-66 | 3 |
chorion | 2.74e-29 | 7 |
perirenal fat | 7.14e-26 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 9.18e-26 | 2 |
developing epithelial placode | 9.18e-26 | 2 |
respiratory system arterial blood vessel | 9.18e-26 | 2 |
respiratory system blood vessel | 9.18e-26 | 2 |
respiratory system artery | 9.18e-26 | 2 |
head blood vessel | 9.18e-26 | 2 |
pulmonary artery | 9.18e-26 | 2 |
pulmonary vascular system | 9.18e-26 | 2 |
pharyngeal vasculature | 9.18e-26 | 2 |
truncus arteriosus | 9.18e-26 | 2 |
aortic sac | 9.18e-26 | 2 |
pharyngeal arch artery | 9.18e-26 | 2 |
outflow tract | 1.12e-17 | 3 |
extraembryonic membrane | 2.95e-15 | 14 |
membranous layer | 2.95e-15 | 14 |
heart blood vessel | 3.60e-11 | 5 |
coronary vessel | 3.60e-11 | 5 |
protuberance | 1.57e-09 | 6 |
pharyngeal arch | 1.57e-09 | 6 |
pharyngeal epithelium | 1.57e-09 | 6 |
embryonic head | 1.57e-09 | 6 |
extraembryonic structure | 2.35e-09 | 24 |
simple columnar epithelium | 8.85e-07 | 9 |