FFCP PHASE1:Hg19::chr1:101705165..101705181,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:101705165..101705181,+ to FFCP PHASE1:Hg19::chr1:101705165..101705181,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:101705165..101705181,+ | |||
|coexpression_cluster_id=C3839 | |||
|description=CAGE_peak_at_chr1:101705165..101705181,+ | |||
|id=chr1:101705165..101705181,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.86e-25!24;CL:0000071!3.62e-19!18;CL:0002546!3.62e-19!18;CL:0000115!1.08e-18!35;CL:0002078!2.08e-13!44;CL:1000413!4.46e-12!9;CL:0000213!9.50e-10!57;CL:0000215!9.50e-10!57;CL:0000084!9.02e-09!25;CL:0000827!9.02e-09!25;CL:0000791!3.39e-08!18;CL:0000789!3.39e-08!18;CL:0002420!3.39e-08!18;CL:0002419!3.39e-08!18;CL:0000790!3.39e-08!18;CL:0005020!1.61e-07!6;CL:0002138!1.61e-07!6;CL:0005022!1.61e-07!6;CL:0002544!2.02e-07!6;CL:0000542!2.46e-07!53;CL:0000051!2.46e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.68e-60;24!CL:0000071;1.13e-40;18!CL:0000115;1.27e-37;36!CL:1000413;5.72e-30;9!CL:0002078;5.16e-23;45!CL:0002138;7.04e-21;6!CL:0000213;1.06e-14;58!CL:0000215;1.06e-14;58!CL:0002544;6.12e-12;6!CL:0002144;2.14e-11;3!CL:0000076;2.13e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.54e-60,24;CL:0000115,5.39e-45,36;CL:0000071,8.47e-41,18;CL:0002546,8.47e-41,18;CL:0002078,1.82e-35,45;CL:1000413,6.70e-30,9;CL:0000213,6.49e-27,58;CL:0000215,6.49e-27,58;CL:0005020,8.67e-21,6;CL:0002138,8.67e-21,6;CL:0005022,8.67e-21,6;CL:0002544,7.83e-12,6;CL:0000222,1.79e-11,121;CL:0002144,2.51e-11,3;CL:0000076,1.56e-10,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.13e-40;18!CL:0005022;7.04e-21;6!UBERON:0010226;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.62e-19!18;UBERON:0004638!3.62e-19!18;UBERON:0004852!3.62e-19!18;UBERON:0007023!4.60e-16!115;UBERON:0000487!8.29e-15!22;UBERON:0006914!1.80e-12!25;UBERON:0003915!4.46e-12!9;UBERON:0004700!4.46e-12!9;UBERON:0001917!4.46e-12!9;UBERON:0001009!1.91e-11!113;UBERON:0004535!1.60e-10!110;UBERON:0000055!1.01e-07!69;UBERON:0000178!1.25e-07!15;UBERON:0000179!1.25e-07!15;UBERON:0000463!1.25e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.13e-40;18!UBERON:0001986;1.13e-40;18!UBERON:0004852;1.13e-40;18!UBERON:0000487;5.27e-33;22!UBERON:0003915;5.72e-30;9!UBERON:0004700;5.72e-30;9!UBERON:0001917;5.72e-30;9!UBERON:0006914;7.33e-29;25!UBERON:0000490;1.01e-20;33!UBERON:0001473;1.01e-15;8!UBERON:0004536;1.01e-15;8!UBERON:0006558;1.01e-15;8!UBERON:0000055;2.48e-13;65!UBERON:0002465;1.29e-12;10!UBERON:0010523;2.14e-11;3!UBERON:0001915;2.14e-11;3!UBERON:0001982;2.14e-11;3!UBERON:0007500;9.46e-10;56!UBERON:0001981;9.46e-10;56!UBERON:0004537;9.46e-10;56!UBERON:0002084;6.46e-09;1!UBERON:0002082;6.46e-09;1!UBERON:0002049;9.78e-09;75!UBERON:0007798;9.78e-09;75!UBERON:0002193;4.46e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.47e-41,18;UBERON:0001986,8.47e-41,18;UBERON:0004852,8.47e-41,18;UBERON:0000487,4.16e-33,22;UBERON:0003915,6.70e-30,9;UBERON:0004700,6.70e-30,9;UBERON:0001917,6.70e-30,9;UBERON:0006914,5.96e-29,25;UBERON:0000055,1.48e-22,68;UBERON:0004535,7.82e-22,109;UBERON:0001009,3.71e-21,112;UBERON:0002049,2.58e-19,78;UBERON:0007798,2.58e-19,78;UBERON:0001473,1.18e-15,8;UBERON:0004536,1.18e-15,8;UBERON:0006558,1.18e-15,8;UBERON:0007500,8.10e-14,59;UBERON:0001981,8.10e-14,59;UBERON:0004537,8.10e-14,59;UBERON:0006965,8.10e-14,59;UBERON:0002465,1.45e-12,10;UBERON:0010523,2.51e-11,3;UBERON:0001915,2.51e-11,3;UBERON:0001982,2.51e-11,3;UBERON:0004872,3.76e-11,83;UBERON:0002084,5.75e-09,1;UBERON:0002082,5.75e-09,1;UBERON:0010226,5.75e-09,1;UBERON:0003914,2.62e-07,117;UBERON:0004111,5.07e-07,240 | |||
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| ||
|short_description=p@chr1:101705165..101705181,+ | |||
}} | }} |
Latest revision as of 19:01, 27 July 2015
Short description: | p@chr1:101705165..101705181, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:101705165..101705181, + |
Coexpression cluster: | C3839_hairy_rhabdomyosarcoma_Lymphatic_Endothelial_small_leukemia_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.54e-60 | 24 |
endothelial cell | 5.39e-45 | 36 |
blood vessel endothelial cell | 8.47e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.47e-41 | 18 |
meso-epithelial cell | 1.82e-35 | 45 |
endothelial cell of artery | 6.70e-30 | 9 |
lining cell | 6.49e-27 | 58 |
barrier cell | 6.49e-27 | 58 |
lymphangioblast | 8.67e-21 | 6 |
endothelial cell of lymphatic vessel | 8.67e-21 | 6 |
vascular lymphangioblast | 8.67e-21 | 6 |
aortic endothelial cell | 7.83e-12 | 6 |
mesodermal cell | 1.79e-11 | 121 |
capillary endothelial cell | 2.51e-11 | 3 |
squamous epithelial cell | 1.56e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.47e-41 | 18 |
endothelium | 8.47e-41 | 18 |
cardiovascular system endothelium | 8.47e-41 | 18 |
simple squamous epithelium | 4.16e-33 | 22 |
endothelial tube | 6.70e-30 | 9 |
arterial system endothelium | 6.70e-30 | 9 |
endothelium of artery | 6.70e-30 | 9 |
squamous epithelium | 5.96e-29 | 25 |
vessel | 1.48e-22 | 68 |
cardiovascular system | 7.82e-22 | 109 |
circulatory system | 3.71e-21 | 112 |
vasculature | 2.58e-19 | 78 |
vascular system | 2.58e-19 | 78 |
lymphatic vessel | 1.18e-15 | 8 |
lymph vasculature | 1.18e-15 | 8 |
lymphatic part of lymphoid system | 1.18e-15 | 8 |
epithelial tube open at both ends | 8.10e-14 | 59 |
blood vessel | 8.10e-14 | 59 |
blood vasculature | 8.10e-14 | 59 |
vascular cord | 8.10e-14 | 59 |
lymphoid system | 1.45e-12 | 10 |
microcirculatory vessel | 2.51e-11 | 3 |
endothelium of capillary | 2.51e-11 | 3 |
capillary | 2.51e-11 | 3 |
splanchnic layer of lateral plate mesoderm | 3.76e-11 | 83 |
heart left ventricle | 5.75e-09 | 1 |
cardiac ventricle | 5.75e-09 | 1 |
future cardiac ventricle | 5.75e-09 | 1 |
epithelial tube | 2.62e-07 | 117 |
anatomical conduit | 5.07e-07 | 240 |