FFCP PHASE1:Hg19::chr1:113261573..113261600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:113261573..113261600,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr1:113261573..113261600,+ | |description=CAGE_peak_at_chr1:113261573..113261600,+ | ||
|id=chr1:113261573..113261600,+ | |id=chr1:113261573..113261600,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.12e-17;1!CL:0002372;1.12e-17;1!CL:0002591;1.12e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.03e-17,1;CL:0002372,1.03e-17,1;CL:0002591,1.70e-17,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.50e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!1.49e-07!14;DOID:120!4.15e-07!27 | |ontology_enrichment_disease=DOID:2394!1.49e-07!14;DOID:120!4.15e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:6193;5.72e-18;1!DOID:3350;1.17e-09;2!DOID:4231;1.64e-09;2!DOID:1907;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.26e-18,1;DOID:3350,1.12e-09,2;DOID:4231,1.71e-09,2;DOID:1907,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.31e-10!57;UBERON:0005068!9.31e-10!57;UBERON:0006241!9.31e-10!57;UBERON:0007135!9.31e-10!57;UBERON:0007023!5.02e-09!115;UBERON:0000073!5.53e-09!94;UBERON:0001016!5.53e-09!94;UBERON:0005743!5.70e-09!86;UBERON:0001017!9.24e-09!82;UBERON:0000955!7.19e-08!69;UBERON:0006238!7.19e-08!69;UBERON:0003076!7.59e-08!15;UBERON:0003057!7.59e-08!15;UBERON:0002616!2.32e-07!59;UBERON:0003075!7.33e-07!86;UBERON:0007284!7.33e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!9.31e-10!57;UBERON:0005068!9.31e-10!57;UBERON:0006241!9.31e-10!57;UBERON:0007135!9.31e-10!57;UBERON:0007023!5.02e-09!115;UBERON:0000073!5.53e-09!94;UBERON:0001016!5.53e-09!94;UBERON:0005743!5.70e-09!86;UBERON:0001017!9.24e-09!82;UBERON:0000955!7.19e-08!69;UBERON:0006238!7.19e-08!69;UBERON:0003076!7.59e-08!15;UBERON:0003057!7.59e-08!15;UBERON:0002616!2.32e-07!59;UBERON:0003075!7.33e-07!86;UBERON:0007284!7.33e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.11e-34;2!UBERON:0002757;1.11e-34;2!UBERON:0010134;1.11e-34;2!UBERON:0005408;1.11e-34;2!UBERON:0001899;1.11e-34;2!UBERON:0003296;6.79e-18;4!UBERON:0010133;6.79e-18;4!UBERON:0002784;6.79e-18;4!UBERON:0001894;1.21e-10;7!UBERON:0000078;1.64e-09;2!UBERON:0002012;1.64e-09;2!UBERON:0008886;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.11e-34,2;UBERON:0002757,1.11e-34,2;UBERON:0010134,1.11e-34,2;UBERON:0005408,1.11e-34,2;UBERON:0001899,1.11e-34,2;UBERON:0003296,6.79e-18,4;UBERON:0010133,6.79e-18,4;UBERON:0002784,6.79e-18,4;UBERON:0001894,1.21e-10,7;UBERON:0006222,1.21e-10,7;UBERON:0000078,2.02e-09,2;UBERON:0007497,2.02e-09,2;UBERON:0003643,2.02e-09,2;UBERON:0003504,2.02e-09,2;UBERON:0003469,2.02e-09,2;UBERON:0003496,2.02e-09,2;UBERON:0002012,2.02e-09,2;UBERON:0008886,2.02e-09,2;UBERON:0007303,2.02e-09,2;UBERON:0002061,2.02e-09,2;UBERON:0005432,2.02e-09,2;UBERON:0004363,2.02e-09,2 | |||
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| ||
|short_description=p@chr1:113261573..113261600,+ | |short_description=p@chr1:113261573..113261600,+ | ||
}} | }} |
Latest revision as of 19:50, 27 July 2015
Short description: | p@chr1:113261573..113261600, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:113261573..113261600, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.03e-17 | 1 |
myotube | 1.03e-17 | 1 |
smooth muscle cell of the pulmonary artery | 1.70e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.11e-34 | 2 |
regional part of epithalamus | 1.11e-34 | 2 |
secretory circumventricular organ | 1.11e-34 | 2 |
circumventricular organ | 1.11e-34 | 2 |
epithalamus | 1.11e-34 | 2 |
gland of diencephalon | 6.79e-18 | 4 |
neuroendocrine gland | 6.79e-18 | 4 |
regional part of diencephalon | 6.79e-18 | 4 |
diencephalon | 1.21e-10 | 7 |
future diencephalon | 1.21e-10 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.02e-09 | 2 |
developing epithelial placode | 2.02e-09 | 2 |
respiratory system arterial blood vessel | 2.02e-09 | 2 |
respiratory system blood vessel | 2.02e-09 | 2 |
respiratory system artery | 2.02e-09 | 2 |
head blood vessel | 2.02e-09 | 2 |
pulmonary artery | 2.02e-09 | 2 |
pulmonary vascular system | 2.02e-09 | 2 |
pharyngeal vasculature | 2.02e-09 | 2 |
truncus arteriosus | 2.02e-09 | 2 |
aortic sac | 2.02e-09 | 2 |
pharyngeal arch artery | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.26e-18 | 1 |
mesenchymal cell neoplasm | 1.12e-09 | 2 |
histiocytoma | 1.71e-09 | 2 |
malignant fibroxanthoma | 1.71e-09 | 2 |