FFCP PHASE1:Hg19::chr1:113261573..113261600,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:113261573..113261600,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_at_chr1:113261573..113261600,+ | |description=CAGE_peak_at_chr1:113261573..113261600,+ | ||
|id=chr1:113261573..113261600,+ | |id=chr1:113261573..113261600,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.12e-17;1!CL:0002372;1.12e-17;1!CL:0002591;1.12e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.03e-17,1;CL:0002372,1.03e-17,1;CL:0002591,1.70e-17,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.50e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!1.49e-07!14;DOID:120!4.15e-07!27 | |ontology_enrichment_disease=DOID:2394!1.49e-07!14;DOID:120!4.15e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:6193;5.72e-18;1!DOID:3350;1.17e-09;2!DOID:4231;1.64e-09;2!DOID:1907;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.26e-18,1;DOID:3350,1.12e-09,2;DOID:4231,1.71e-09,2;DOID:1907,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.31e-10!57;UBERON:0005068!9.31e-10!57;UBERON:0006241!9.31e-10!57;UBERON:0007135!9.31e-10!57;UBERON:0007023!5.02e-09!115;UBERON:0000073!5.53e-09!94;UBERON:0001016!5.53e-09!94;UBERON:0005743!5.70e-09!86;UBERON:0001017!9.24e-09!82;UBERON:0000955!7.19e-08!69;UBERON:0006238!7.19e-08!69;UBERON:0003076!7.59e-08!15;UBERON:0003057!7.59e-08!15;UBERON:0002616!2.32e-07!59;UBERON:0003075!7.33e-07!86;UBERON:0007284!7.33e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!9.31e-10!57;UBERON:0005068!9.31e-10!57;UBERON:0006241!9.31e-10!57;UBERON:0007135!9.31e-10!57;UBERON:0007023!5.02e-09!115;UBERON:0000073!5.53e-09!94;UBERON:0001016!5.53e-09!94;UBERON:0005743!5.70e-09!86;UBERON:0001017!9.24e-09!82;UBERON:0000955!7.19e-08!69;UBERON:0006238!7.19e-08!69;UBERON:0003076!7.59e-08!15;UBERON:0003057!7.59e-08!15;UBERON:0002616!2.32e-07!59;UBERON:0003075!7.33e-07!86;UBERON:0007284!7.33e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.11e-34;2!UBERON:0002757;1.11e-34;2!UBERON:0010134;1.11e-34;2!UBERON:0005408;1.11e-34;2!UBERON:0001899;1.11e-34;2!UBERON:0003296;6.79e-18;4!UBERON:0010133;6.79e-18;4!UBERON:0002784;6.79e-18;4!UBERON:0001894;1.21e-10;7!UBERON:0000078;1.64e-09;2!UBERON:0002012;1.64e-09;2!UBERON:0008886;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.11e-34,2;UBERON:0002757,1.11e-34,2;UBERON:0010134,1.11e-34,2;UBERON:0005408,1.11e-34,2;UBERON:0001899,1.11e-34,2;UBERON:0003296,6.79e-18,4;UBERON:0010133,6.79e-18,4;UBERON:0002784,6.79e-18,4;UBERON:0001894,1.21e-10,7;UBERON:0006222,1.21e-10,7;UBERON:0000078,2.02e-09,2;UBERON:0007497,2.02e-09,2;UBERON:0003643,2.02e-09,2;UBERON:0003504,2.02e-09,2;UBERON:0003469,2.02e-09,2;UBERON:0003496,2.02e-09,2;UBERON:0002012,2.02e-09,2;UBERON:0008886,2.02e-09,2;UBERON:0007303,2.02e-09,2;UBERON:0002061,2.02e-09,2;UBERON:0005432,2.02e-09,2;UBERON:0004363,2.02e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,2.69927076191554,1.2162378064119,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.532685175939381,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.17472666824203,2.92376255201748,0,0,0,0.193978032976839,0.441280633457501,3.38971111170799,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.434674820589684,0.553394539744923,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,0,0.465788870628778,0,0.265841714557995,0,1.6528336989694,0.761610424337591,0,0.181848659202559,0.214821114084977,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,5.35701835878287,11.43364655544,0,0,0,0,0,0.271878931907327,0.197318320688547,0,0,0,0,0,0,0.431855182437243,0,4.50302228312935,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0.829169439458779,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,2.69927076191554,1.2162378064119,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.532685175939381,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.17472666824203,2.92376255201748,0,0,0,0.193978032976839,0.441280633457501,3.38971111170799,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.434674820589684,0.553394539744923,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,0,0.465788870628778,0,0.265841714557995,0,1.6528336989694,0.761610424337591,0,0.181848659202559,0.214821114084977,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,5.35701835878287,11.43364655544,0,0,0,0,0,0.271878931907327,0.197318320688547,0,0,0,0,0,0,0.431855182437243,0,4.50302228312935,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0.829169439458779,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:113261573..113261600,+ | |short_description=p@chr1:113261573..113261600,+ | ||
}} | }} |
Latest revision as of 19:50, 27 July 2015
Short description: | p@chr1:113261573..113261600, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:113261573..113261600, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.03e-17 | 1 |
myotube | 1.03e-17 | 1 |
smooth muscle cell of the pulmonary artery | 1.70e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.11e-34 | 2 |
regional part of epithalamus | 1.11e-34 | 2 |
secretory circumventricular organ | 1.11e-34 | 2 |
circumventricular organ | 1.11e-34 | 2 |
epithalamus | 1.11e-34 | 2 |
gland of diencephalon | 6.79e-18 | 4 |
neuroendocrine gland | 6.79e-18 | 4 |
regional part of diencephalon | 6.79e-18 | 4 |
diencephalon | 1.21e-10 | 7 |
future diencephalon | 1.21e-10 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.02e-09 | 2 |
developing epithelial placode | 2.02e-09 | 2 |
respiratory system arterial blood vessel | 2.02e-09 | 2 |
respiratory system blood vessel | 2.02e-09 | 2 |
respiratory system artery | 2.02e-09 | 2 |
head blood vessel | 2.02e-09 | 2 |
pulmonary artery | 2.02e-09 | 2 |
pulmonary vascular system | 2.02e-09 | 2 |
pharyngeal vasculature | 2.02e-09 | 2 |
truncus arteriosus | 2.02e-09 | 2 |
aortic sac | 2.02e-09 | 2 |
pharyngeal arch artery | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.26e-18 | 1 |
mesenchymal cell neoplasm | 1.12e-09 | 2 |
histiocytoma | 1.71e-09 | 2 |
malignant fibroxanthoma | 1.71e-09 | 2 |