FFCP PHASE1:Hg19::chr1:1288794..1288843,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1288794..1288843,- | |||
|coexpression_cluster_id=C1000 | |||
|description=CAGE_peak_at_chr1:1288794..1288843,- | |description=CAGE_peak_at_chr1:1288794..1288843,- | ||
|id=chr1:1288794..1288843,- | |id=chr1:1288794..1288843,- | ||
|ontology_enrichment_celltype=CL:0000055!2.52e-34!180;CL:0000057!1.60e-26!75;CL:0002620!6.56e-12!23;CL:0000183!1.71e-11!59;CL:0000680!2.25e-11!57;CL:0000056!2.25e-11!57;CL:0000355!2.25e-11!57;CL:0000187!3.82e-10!54;CL:0000048!4.92e-10!430;CL:0000723!5.42e-10!436;CL:0002334!1.25e-09!12;CL:0000034!2.21e-09!444;CL:0000136!9.46e-09!15;CL:0000393!1.23e-08!60;CL:0000211!1.23e-08!60;CL:0000192!9.57e-08!42;CL:0000514!9.57e-08!42;CL:0002371!5.79e-07!591 | |ontology_enrichment_celltype=CL:0000055!2.52e-34!180;CL:0000057!1.60e-26!75;CL:0002620!6.56e-12!23;CL:0000183!1.71e-11!59;CL:0000680!2.25e-11!57;CL:0000056!2.25e-11!57;CL:0000355!2.25e-11!57;CL:0000187!3.82e-10!54;CL:0000048!4.92e-10!430;CL:0000723!5.42e-10!436;CL:0002334!1.25e-09!12;CL:0000034!2.21e-09!444;CL:0000136!9.46e-09!15;CL:0000393!1.23e-08!60;CL:0000211!1.23e-08!60;CL:0000192!9.57e-08!42;CL:0000514!9.57e-08!42;CL:0002371!5.79e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.84e-13;12!CL:0002620;1.57e-10;23!CL:0002320;2.15e-08;188!CL:0000136;3.92e-08;13!CL:0000057;4.81e-08;73!CL:0002559;2.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.52e-24,76;CL:0002334,2.09e-13,12;CL:0000048,8.76e-13,427;CL:0000723,3.41e-12,433;CL:0000034,1.95e-11,441;CL:0002320,3.50e-11,361;CL:0002620,1.84e-10,23;CL:0000136,4.05e-10,15;CL:0000134,2.14e-08,354;CL:0002559,1.61e-07,5;CL:0000219,3.44e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.00e-17!83;UBERON:0002329!8.00e-17!83;UBERON:0003077!8.00e-17!83;UBERON:0003059!8.00e-17!83;UBERON:0007282!8.00e-17!83;UBERON:0009618!8.00e-17!83;UBERON:0007285!8.00e-17!83;UBERON:0004290!1.66e-14!70;UBERON:0004923!1.60e-12!57;UBERON:0005256!2.71e-12!143;UBERON:0002199!5.60e-12!45;UBERON:0002416!5.60e-12!45;UBERON:0003102!1.35e-11!95;UBERON:0000486!2.02e-11!82;UBERON:0002385!3.66e-11!63;UBERON:0001015!3.66e-11!63;UBERON:0000383!3.66e-11!63;UBERON:0001134!5.93e-11!61;UBERON:0002036!5.93e-11!61;UBERON:0003082!5.93e-11!61;UBERON:0000475!1.30e-10!365;UBERON:0002100!5.45e-10!216;UBERON:0002097!3.07e-09!40;UBERON:0001013!4.58e-08!14 | |ontology_enrichment_uberon=UBERON:0000914!8.00e-17!83;UBERON:0002329!8.00e-17!83;UBERON:0003077!8.00e-17!83;UBERON:0003059!8.00e-17!83;UBERON:0007282!8.00e-17!83;UBERON:0009618!8.00e-17!83;UBERON:0007285!8.00e-17!83;UBERON:0004290!1.66e-14!70;UBERON:0004923!1.60e-12!57;UBERON:0005256!2.71e-12!143;UBERON:0002199!5.60e-12!45;UBERON:0002416!5.60e-12!45;UBERON:0003102!1.35e-11!95;UBERON:0000486!2.02e-11!82;UBERON:0002385!3.66e-11!63;UBERON:0001015!3.66e-11!63;UBERON:0000383!3.66e-11!63;UBERON:0001134!5.93e-11!61;UBERON:0002036!5.93e-11!61;UBERON:0003082!5.93e-11!61;UBERON:0000475!1.30e-10!365;UBERON:0002100!5.45e-10!216;UBERON:0002097!3.07e-09!40;UBERON:0001013!4.58e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.66e-12;14!UBERON:0004457;3.06e-10;9!UBERON:0000042;3.06e-10;9!UBERON:0002384;5.14e-10;198!UBERON:0003688;6.69e-09;6!UBERON:0002358;6.69e-09;6!UBERON:0003684;6.69e-09;6!UBERON:0001178;6.69e-09;6!UBERON:0004905;1.43e-08;8!UBERON:0000982;1.43e-08;8!UBERON:0004770;1.43e-08;8!UBERON:0002199;7.85e-08;46!UBERON:0002416;7.85e-08;46!UBERON:0002073;2.36e-07;5!UBERON:0002072;3.15e-07;5!UBERON:0003102;3.30e-07;50!UBERON:0011135;3.80e-07;5!UBERON:0002216;3.80e-07;5!UBERON:0011134;3.80e-07;5!UBERON:0002209;3.80e-07;5!UBERON:0002213;3.80e-07;5!UBERON:0007844;3.80e-07;5!UBERON:0011138;3.80e-07;5!UBERON:0001130;3.80e-07;5!UBERON:0001066;3.80e-07;5!UBERON:0001468;3.80e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.50e-12,46;UBERON:0002416,1.50e-12,46;UBERON:0002384,4.59e-12,371;UBERON:0004923,5.07e-12,66;UBERON:0001013,1.31e-11,14;UBERON:0003102,1.54e-11,99;UBERON:0003688,7.44e-09,6;UBERON:0002358,7.44e-09,6;UBERON:0003684,7.44e-09,6;UBERON:0001178,7.44e-09,6;UBERON:0002097,1.12e-08,41;UBERON:0004905,1.18e-08,8;UBERON:0000982,1.18e-08,8;UBERON:0004770,1.18e-08,8;UBERON:0007503,3.27e-08,78;UBERON:0007524,7.31e-08,73;UBERON:0002329,1.59e-07,71;UBERON:0003059,1.59e-07,71;UBERON:0007282,1.59e-07,71;UBERON:0004290,1.59e-07,71;UBERON:0009618,1.59e-07,71;UBERON:0002073,1.61e-07,5;UBERON:0005086,1.61e-07,5;UBERON:0003077,2.55e-07,72;UBERON:0007285,2.55e-07,72;UBERON:0011135,3.13e-07,5;UBERON:0002216,3.13e-07,5;UBERON:0011134,3.13e-07,5;UBERON:0002209,3.13e-07,5;UBERON:0002213,3.13e-07,5;UBERON:0005856,3.13e-07,5;UBERON:0005866,3.13e-07,5;UBERON:0005863,3.13e-07,5;UBERON:0007844,3.13e-07,5;UBERON:0002072,3.13e-07,5;UBERON:0011138,3.13e-07,5;UBERON:0001130,3.13e-07,5;UBERON:0001066,3.13e-07,5;UBERON:0001468,3.13e-07,5;UBERON:0004457,3.72e-07,12;UBERON:0000042,3.72e-07,12;UBERON:0000486,7.59e-07,83 | |||
|phase1_expression=6.35874327446948,13.274232481241,3.10099689011137,10.007329835313,5.81049422755474,10.4680622892044,7.59899634504932,1.26343974685366,2.61185628199839,0.245733936501509,6.28021051175185,0.218441372130172,1.84636884759917,3.96052329472149,3.97676850873499,0,4.21886169616784,1.46062018077475,3.90346239032406,0,1.83600622119828,1.25381888591235,0,0.821246550437305,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0,0,1.50401373190767,4.34539556882471,0.795285947051099,0.973269740605272,0.945348171640679,1.33037638477538,0.87834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.13967460498122,1.05927344650575,8.03142538096678,3.54668382198357,1.68203280042692,0,0.98667019366864,0.622422070799533,0.269421344139376,0.326923806226917,0.454072282934794,1.15235184896,0,2.18512053781224,0.570471821544449,2.24173020827702,1.40921398372518,0.647491777472526,0.561803226808994,0.408308342509787,1.84251475967652,1.65321249881225,5.94001428641027,5.68713937340681,0,1.43723628363248,0.168336113954066,0.750711119231785,0,1.31693286264251,5.21029252858333,4.95785594391769,0.226864366320042,3.7671823494661,1.06778694409284,1.05965950579781,4.50136644126603,0.824420233907511,3.86460810068444,1.67505170698431,1.5189869901714,4.09235421677034,2.52433774244115,1.47279837827679,2.90962902273861,6.03516307278244,3.12331504505685,0.508681776931463,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,1.56449532329816,9.64861407289328,2.76269842704961,4.64367928031979,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,7.3504355692771,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.517086863031111,7.15312891703765,1.690605505112,3.45719551560332,3.12022310734098,1.02882949704857,4.25547396069835,0.799266537048298,0.714889968290738,4.34097284313154,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,1.09970290300263,0,0,0,0.958499421966331,1.14861935834114,1.42636905040718,1.44781306667579,5.54786070886035,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,3.55805325985506,10.0034104211935,1.35632511849868,4.36738809214695,8.74302045106093,5.36188211115378,1.7571212248907,4.21324539618807,11.3703752027992,8.27784570340039,0.664225598535437,0.553107505625109,2.69339204851057,2.54541504701563,4.11772108573027,0,0,0,1.81876542867756,3.32870879020994,6.65258645325297,4.46594054073798,1.68808170616869,15.155645099386,3.84417447767103,5.11707249066703,2.41280881715411,8.90508398669946,4.62629081407967,5.14929003408069,0.9033987161519,3.63478100428535,5.694308544538,0.120859449591622,0,0,1.37777337797528,2.73136752010076,4.58935452357984,0,0.15403067420883,0,1.46139224653261,0,0,0,0.215915916102139,0,1.35473218771926,1.50506932156456,0,0,0.671624264166535,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0.721287081534056,0.824125183365091,0.082509499920588,0,0,0,0.96670718292122,0.770243085573222,1.22802939780904,0.275673144969061,1.07420244868274,2.46528379654188,0.511359764496605,1.15741646340759,0,0,0,0.10115778085555,0.464845549297286,4.7221852024596,0.6970372701606,0,0.532306030317022,0.869932992075073,1.11194531462352,0,0.744316738719335,0,0.38126038784765,0,3.42351190427136,0.636406495851874,0,0.539617372749944,1.92175920815238,0.824686816419805,0.606547444719948,0,0.842516912477962,0.48763373908959,1.94970791705028,2.11300293513511,1.22849920267187,3.67654123079653,6.78048699721457,1.65409603063837,0.66343897524122,2.19225442626881,1.15755106853338,0.655894752046633,0.202910376962704,0.6196469961995,0.281695602532241,0,0.392996164052485,0,1.06428319221179,10.9775970354785,9.87884678879706,0,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.71623345421307,1.48482340416319,0.921482106297696,0,0.140669416410513,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0.933118762985422,0,0,0,1.08507746200627,0,3.33410970433911,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0.221158519862449,0,0,0,0,0.692552326534174,0,0.46112780877612,0.0897576444097721,0,2.23300811812344,2.01514705484097,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,1.13735843331278,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0,0,0.873633341210151,0,0,0,0,0.775912131907355,0.0882561266915003,0.677942222341597,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0.124252535565433,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| ||
|short_description=p@chr1:1288794..1288843,- | |short_description=p@chr1:1288794..1288843,- | ||
}} | }} |
Latest revision as of 20:32, 27 July 2015
Short description: | p@chr1:1288794..1288843, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1288794..1288843, - |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.52e-24 | 76 |
preadipocyte | 2.09e-13 | 12 |
multi fate stem cell | 8.76e-13 | 427 |
somatic stem cell | 3.41e-12 | 433 |
stem cell | 1.95e-11 | 441 |
connective tissue cell | 3.50e-11 | 361 |
skin fibroblast | 1.84e-10 | 23 |
fat cell | 4.05e-10 | 15 |
mesenchymal cell | 2.14e-08 | 354 |
hair follicle cell | 1.61e-07 | 5 |
motile cell | 3.44e-07 | 386 |