FFCP PHASE1:Hg19::chr1:15563005..15563040,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:15563005..15563040,+ | |||
|coexpression_cluster_id=C169 | |||
|description=CAGE_peak_at_chr1:15563005..15563040,+ | |||
|id=chr1:15563005..15563040,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;5.59e-09;1!DOID:0060085;1.77e-08;1!DOID:3165;1.77e-08;1!DOID:0060121;1.77e-08;1!DOID:2438;1.77e-08;1!DOID:4418;1.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.59e-09,1;DOID:0060085,1.84e-08,1;DOID:3165,1.84e-08,1;DOID:0060121,1.84e-08,1;DOID:2438,1.84e-08,1;DOID:4418,1.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.50e-18!34;UBERON:0001869!1.65e-18!32;UBERON:0002020!1.77e-18!34;UBERON:0003528!1.77e-18!34;UBERON:0002791!1.53e-17!33;UBERON:0000955!1.61e-17!69;UBERON:0006238!1.61e-17!69;UBERON:0002780!6.43e-17!41;UBERON:0001890!6.43e-17!41;UBERON:0006240!6.43e-17!41;UBERON:0003080!2.47e-16!42;UBERON:0001049!8.30e-16!57;UBERON:0005068!8.30e-16!57;UBERON:0006241!8.30e-16!57;UBERON:0007135!8.30e-16!57;UBERON:0002619!1.44e-15!22;UBERON:0002616!5.80e-15!59;UBERON:0000956!7.10e-15!25;UBERON:0000203!7.10e-15!25;UBERON:0001017!4.75e-14!82;UBERON:0001950!3.61e-13!20;UBERON:0005743!6.54e-13!86;UBERON:0000073!1.59e-12!94;UBERON:0001016!1.59e-12!94;UBERON:0003056!1.32e-11!61;UBERON:0007023!5.88e-11!115;UBERON:0000033!6.12e-11!123;UBERON:0000153!1.23e-10!129;UBERON:0007811!1.23e-10!129;UBERON:0003075!1.19e-09!86;UBERON:0007284!1.19e-09!86;UBERON:0002346!1.56e-09!90;UBERON:0000200!9.51e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.84e-08;1!UBERON:0002331;4.23e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.98e-08,1;UBERON:0002331,4.19e-07,10;UBERON:0000358,4.19e-07,10;UBERON:0000307,4.19e-07,10;UBERON:0000091,4.19e-07,10;UBERON:0000087,4.19e-07,10;UBERON:0007010,4.19e-07,10;UBERON:0007806,4.19e-07,10;UBERON:0008780,4.19e-07,10;UBERON:0005728,4.19e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,1.54934401160603,0,0,0,0,0,0,0.32389366601898,0.515151135268373,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0.348259474598534,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,14.5280736733363,0,0.490080431962063,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0.146508179271894,0,0,0,0,0,0,0,1.26602474769461,0.222617410045812,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,1.35357396370308,0.784250137270958,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,8.59911273173804,2.71840665682306,4.9078316267564,0.134802265961354,0,0,0,0,0,0,0,0,0,4.96067284067825,0.207376382794494,0,0,0,0,0.284609546029793,0.832048038078832,0,0,0.0870592065804026,1.7472666824203,0,0,0,0.0821154570532092,0,0,0,0.959293472527256,2.38457534043588,0.759729551470544,0,0.0801588202515337,0,0,0,0,5.3194449337209,0,11.3069807364544,0,0.135904206073614,0.209205692624666,0,5.49006120812886,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0,0,35.6474727996953,0.795229689809303,0.817220436669454,0,0,0,0,0,0.364497339948148,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,4.18671855821629,0,0.566560457600628,0,0,0.258565912723101,0.13223260174269,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0.776503360757966,0.310482014706917,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,1.13503190713367,0,0,0,0.639471856518258,0.646948868380091,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.798169295285756,0.205116364240755,0,0.691572524642179,0.322951291263702,0,14.8203054936549,0,0,0,0,0,0,0.0752103283492573,6.65626726721616,0,0,0.163771917510097,0,0.337687923091973,0,1.03343398250592,0.443910671357348,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0.171488009437418,3.46645638181842,0.263091094251396,0,0,0.470958557103084,0.314231179832004,0,0,0,0,0,0,0.23248285073625,1.39086617842064,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,3.33710794291826,0,0,0,0,0,0,0,0,0,13.4127430429424,0.603851374266694,0,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0.252332849670158,0,0.253397002022874,0,0,0,0,0.378893491091197,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr1:15563005..15563040,+ | |||
}} |
Latest revision as of 22:19, 27 July 2015
Short description: | p@chr1:15563005..15563040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:15563005..15563040, + |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.98e-08 | 1 |
umbilical cord | 4.19e-07 | 10 |
blastocyst | 4.19e-07 | 10 |
blastula | 4.19e-07 | 10 |
bilaminar disc | 4.19e-07 | 10 |
inner cell mass | 4.19e-07 | 10 |
cleaving embryo | 4.19e-07 | 10 |
connecting stalk | 4.19e-07 | 10 |
inner cell mass derived epiblast | 4.19e-07 | 10 |
extraembryonic mesoderm | 4.19e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.59e-09 | 1 |
organ system benign neoplasm | 1.84e-08 | 1 |
skin benign neoplasm | 1.84e-08 | 1 |
integumentary system benign neoplasm | 1.84e-08 | 1 |
dermis tumor | 1.84e-08 | 1 |
cutaneous fibrous histiocytoma | 1.84e-08 | 1 |