FFCP PHASE1:Hg19::chr1:162954730..162954735,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:162954730..162954735,+
|short_description=p@chr1:162954730..162954735,+
|description=CAGE_peak_at_chr1:162954730..162954735,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:162954730..162954735,+ | |||
|description=CAGE_peak_at_chr1:162954730..162954735,+ | |||
|id=chr1:162954730..162954735,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.79e-33!32;CL:0000192!3.84e-24!42;CL:0000514!3.84e-24!42;CL:0000187!9.32e-18!54;CL:0000222!4.44e-17!119;CL:0000680!1.39e-16!57;CL:0000056!1.39e-16!57;CL:0000355!1.39e-16!57;CL:0000183!7.19e-16!59;CL:0000393!1.57e-15!60;CL:0000211!1.57e-15!60;CL:0002594!3.15e-15!4;CL:1000306!3.92e-15!4;CL:0002547!3.92e-15!4;CL:0002592!1.37e-11!3;CL:1000413!7.56e-10!9;CL:0002544!1.02e-09!6;CL:0000055!1.33e-09!180;CL:0002539!2.90e-09!10;CL:0002589!7.92e-09!2;CL:0002596!2.17e-08!2;CL:0000220!2.87e-07!246;CL:0002321!3.74e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002589;3.93e-29;2!CL:0000359;7.81e-27;32!CL:0000192;1.28e-16;43!CL:0002581;1.78e-15;1!CL:1000306;2.65e-15;4!CL:0002547;2.65e-15;4!CL:0002594;4.23e-15;4!CL:0000187;7.55e-09;55!CL:0002596;2.15e-08;2!CL:0000393;8.40e-08;61!CL:0000211;8.40e-08;61 | |||
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|ontology_enrichment_development_v019=CL:0000514;1.28e-16;43!CL:0000355;1.33e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.90e-15!14;DOID:120!3.61e-09!27;DOID:193!2.01e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.14e-09,14 | |||
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|short_description=p@chr1:162954730..162954735,+ | |||
}} | }} |
Latest revision as of 23:45, 27 July 2015
Short description: | p@chr1:162954730..162954735, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:162954730..162954735, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 4.55e-29 | 2 |
vascular associated smooth muscle cell | 1.25e-27 | 32 |
smooth muscle cell | 2.06e-20 | 43 |
smooth muscle myoblast | 2.06e-20 | 43 |
muscle cell | 8.03e-16 | 55 |
perirenal preadipocyte | 1.54e-15 | 1 |
fibroblast of tunica adventitia of artery | 1.92e-15 | 4 |
fibroblast of the aortic adventitia | 1.92e-15 | 4 |
smooth muscle cell of the umbilical artery | 4.23e-15 | 4 |
muscle precursor cell | 5.72e-15 | 58 |
myoblast | 5.72e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.72e-15 | 58 |
electrically responsive cell | 3.36e-14 | 61 |
electrically active cell | 3.36e-14 | 61 |
smooth muscle cell of the carotid artery | 1.73e-08 | 2 |
mesodermal cell | 8.66e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.14e-09 | 14 |