FFCP PHASE1:Hg19::chr1:176668544..176668553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:176668544..176668553,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr1:176668544..176668553,+ | |description=CAGE_peak_at_chr1:176668544..176668553,+ | ||
|id=chr1:176668544..176668553,+ | |id=chr1:176668544..176668553,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.80e-21!3;CL:0002591!3.10e-08!1;CL:0000569!2.27e-07!4;CL:0000011!2.27e-07!4 | |ontology_enrichment_celltype=CL:0002541!3.80e-21!3;CL:0002591!3.10e-08!1;CL:0000569!2.27e-07!4;CL:0000011!2.27e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.24e-88;3!CL:0002591;4.66e-66;1!CL:0000349;4.91e-15;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.24e-88,3;CL:0002591,4.66e-66,1;CL:0000349,4.91e-15,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2513!6.10e-08!1 | |ontology_enrichment_disease=DOID:2513!6.10e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!3.80e-21!3;UBERON:0000920!3.80e-21!3;UBERON:0003124!7.65e-16!7;UBERON:0005631!6.27e-12!14;UBERON:0000158!6.27e-12!14;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0000478!7.53e-07!24 | |ontology_enrichment_uberon=UBERON:0000476!3.80e-21!3;UBERON:0000920!3.80e-21!3;UBERON:0003124!7.65e-16!7;UBERON:0005631!6.27e-12!14;UBERON:0000158!6.27e-12!14;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0000478!7.53e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.24e-88;3!UBERON:0000920;6.24e-88;3!UBERON:0000078;7.05e-34;2!UBERON:0002012;7.05e-34;2!UBERON:0008886;7.05e-34;2!UBERON:0005631;2.08e-27;10!UBERON:0000158;2.08e-27;10!UBERON:0000478;3.75e-12;24!UBERON:0010313;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.24e-88,3;UBERON:0003124,1.49e-38,7;UBERON:0000078,7.05e-34,2;UBERON:0007497,7.05e-34,2;UBERON:0003643,7.05e-34,2;UBERON:0003504,7.05e-34,2;UBERON:0003469,7.05e-34,2;UBERON:0003496,7.05e-34,2;UBERON:0002012,7.05e-34,2;UBERON:0008886,7.05e-34,2;UBERON:0007303,7.05e-34,2;UBERON:0002061,7.05e-34,2;UBERON:0005432,7.05e-34,2;UBERON:0004363,7.05e-34,2;UBERON:0004145,4.09e-23,3;UBERON:0005631,5.89e-20,14;UBERON:0000158,5.89e-20,14;UBERON:0003498,1.83e-14,5;UBERON:0005985,1.83e-14,5;UBERON:0010188,2.74e-12,6;UBERON:0002539,2.74e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0008816,2.74e-12,6;UBERON:0000478,3.75e-12,24;UBERON:0000485,1.21e-08,9;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p@chr1:176668544..176668553,+ | |short_description=p@chr1:176668544..176668553,+ | ||
}} | }} |
Latest revision as of 00:43, 28 July 2015
Short description: | p@chr1:176668544..176668553, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:176668544..176668553, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.24e-88 | 3 |
smooth muscle cell of the pulmonary artery | 4.66e-66 | 1 |
extraembryonic cell | 4.91e-15 | 19 |