FFCP PHASE1:Hg19::chr1:246588844..246588855,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246588844..246588855,- | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_at_chr1:246588844..246588855,- | |description=CAGE_peak_at_chr1:246588844..246588855,- | ||
|id=chr1:246588844..246588855,- | |id=chr1:246588844..246588855,- | ||
|ontology_enrichment_celltype=CL:0000312!5.37e-20!5;CL:0000240!8.92e-17!6;CL:0000311!8.92e-17!6;CL:0000079!8.92e-17!6;CL:0000237!8.92e-17!6;CL:0000036!8.92e-17!6;CL:0000357!8.92e-17!6;CL:0000114!8.92e-17!6;CL:0002231!3.98e-16!3;CL:0002159!1.01e-13!13;CL:0000362!9.72e-13!8;CL:0002327!4.57e-12!4;CL:0002077!2.86e-08!33 | |ontology_enrichment_celltype=CL:0000312!5.37e-20!5;CL:0000240!8.92e-17!6;CL:0000311!8.92e-17!6;CL:0000079!8.92e-17!6;CL:0000237!8.92e-17!6;CL:0000036!8.92e-17!6;CL:0000357!8.92e-17!6;CL:0000114!8.92e-17!6;CL:0002231!3.98e-16!3;CL:0002159!1.01e-13!13;CL:0000362!9.72e-13!8;CL:0002327!4.57e-12!4;CL:0002077!2.86e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0002231;1.09e-44;3!CL:0002166;2.74e-12;3!CL:0000197;8.72e-07;6!CL:0000098;8.72e-07;6!CL:0002167;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.53e-44,3;CL:0002166,2.31e-12,3;CL:0000197,8.97e-07,6;CL:0000098,8.97e-07,6;CL:0002167,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!4.57e-12!4;UBERON:0005333!4.57e-12!4;UBERON:0008425!4.57e-12!4;UBERON:0005311!4.57e-12!4;UBERON:0001003!1.64e-07!14;UBERON:0007376!1.64e-07!14;UBERON:0007383!1.64e-07!14 | |ontology_enrichment_uberon=UBERON:0001911!4.57e-12!4;UBERON:0005333!4.57e-12!4;UBERON:0008425!4.57e-12!4;UBERON:0005311!4.57e-12!4;UBERON:0001003!1.64e-07!14;UBERON:0007376!1.64e-07!14;UBERON:0007383!1.64e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;4.95e-13;11!UBERON:0010147;4.95e-13;11!UBERON:0003937;4.94e-12;12!UBERON:0005399;4.94e-12;12!UBERON:0001708;1.50e-09;4!UBERON:0008895;1.50e-09;4!UBERON:0011159;6.78e-08;5!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,5.42e-13,11;UBERON:0010147,5.42e-13,11;UBERON:0009846,5.42e-13,11;UBERON:0003353,5.42e-13,11;UBERON:0004902,5.42e-13,11;UBERON:0003820,5.42e-13,11;UBERON:0009847,5.42e-13,11;UBERON:0003937,5.37e-12,12;UBERON:0005399,5.37e-12,12;UBERON:0000162,1.99e-10,14;UBERON:0001353,1.99e-10,14;UBERON:0000163,1.99e-10,14;UBERON:0006866,1.99e-10,14;UBERON:0000164,1.99e-10,14;UBERON:0000931,1.99e-10,14;UBERON:0004122,8.46e-10,15;UBERON:0001708,1.32e-09,4;UBERON:0008895,1.32e-09,4;UBERON:0011159,6.13e-08,5;UBERON:0001046,6.15e-08,19;UBERON:0003101,5.57e-07,22;UBERON:0000079,5.57e-07,22;UBERON:0010188,8.02e-07,6;UBERON:0002539,8.02e-07,6;UBERON:0008816,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0,0.53735113621709,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,2.94659164594868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42735109484362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0,0.53735113621709,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,2.94659164594868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42735109484362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:246588844..246588855,- | |short_description=p@chr1:246588844..246588855,- | ||
}} | }} |
Latest revision as of 06:05, 28 July 2015
Short description: | p@chr1:246588844..246588855, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246588844..246588855, - |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.53e-44 | 3 |
epithelial cell of Malassez | 2.31e-12 | 3 |
receptor cell | 8.97e-07 | 6 |
sensory epithelial cell | 8.97e-07 | 6 |
olfactory epithelial cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 5.42e-13 | 11 |
male accessory sex gland | 5.42e-13 | 11 |
embryonic cloacal epithelium | 5.42e-13 | 11 |
epithelium of hindgut | 5.42e-13 | 11 |
urogenital sinus epithelium | 5.42e-13 | 11 |
prostate bud | 5.42e-13 | 11 |
prostate field | 5.42e-13 | 11 |
sex gland | 5.37e-12 | 12 |
male reproductive gland | 5.37e-12 | 12 |
cloaca | 1.99e-10 | 14 |
anal region | 1.99e-10 | 14 |
embryonic cloaca | 1.99e-10 | 14 |
terminal part of digestive tract | 1.99e-10 | 14 |
primitive urogenital sinus | 1.99e-10 | 14 |
proctodeum | 1.99e-10 | 14 |
genitourinary system | 8.46e-10 | 15 |
jaw skeleton | 1.32e-09 | 4 |
splanchnocranium | 1.32e-09 | 4 |
primary subdivision of cranial skeletal system | 6.13e-08 | 5 |
hindgut | 6.15e-08 | 19 |
male organism | 5.57e-07 | 22 |
male reproductive system | 5.57e-07 | 22 |
protuberance | 8.02e-07 | 6 |
pharyngeal arch | 8.02e-07 | 6 |
embryonic head | 8.02e-07 | 6 |