FFCP PHASE1:Hg19::chr1:52940616..52940641,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:52940616..52940641,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr1:52940616..52940641,- | |||
|id=chr1:52940616..52940641,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.62e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.79e-26,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.19e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.12e-11!41;UBERON:0001890!3.12e-11!41;UBERON:0006240!3.12e-11!41;UBERON:0003080!8.52e-11!42;UBERON:0007023!1.97e-10!115;UBERON:0001049!2.29e-10!57;UBERON:0005068!2.29e-10!57;UBERON:0006241!2.29e-10!57;UBERON:0007135!2.29e-10!57;UBERON:0001017!1.78e-09!82;UBERON:0001950!1.93e-09!20;UBERON:0005743!2.00e-09!86;UBERON:0002346!3.64e-09!90;UBERON:0002616!6.99e-09!59;UBERON:0000955!7.37e-09!69;UBERON:0006238!7.37e-09!69;UBERON:0003056!2.43e-08!61;UBERON:0002619!2.97e-08!22;UBERON:0000073!4.05e-08!94;UBERON:0001016!4.05e-08!94;UBERON:0001893!4.86e-08!34;UBERON:0003075!6.13e-08!86;UBERON:0007284!6.13e-08!86;UBERON:0002791!1.30e-07!33;UBERON:0002020!3.81e-07!34;UBERON:0003528!3.81e-07!34;UBERON:0001869!6.94e-07!32;UBERON:0000956!7.74e-07!25;UBERON:0000203!7.74e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0001894;2.47e-15;7!UBERON:0000078;1.21e-13;2!UBERON:0002012;1.21e-13;2!UBERON:0008886;1.21e-13;2!UBERON:0002368;5.61e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0000078,1.37e-13,2;UBERON:0007497,1.37e-13,2;UBERON:0003643,1.37e-13,2;UBERON:0003504,1.37e-13,2;UBERON:0003469,1.37e-13,2;UBERON:0003496,1.37e-13,2;UBERON:0002012,1.37e-13,2;UBERON:0008886,1.37e-13,2;UBERON:0007303,1.37e-13,2;UBERON:0002061,1.37e-13,2;UBERON:0005432,1.37e-13,2;UBERON:0004363,1.37e-13,2;UBERON:0004145,1.67e-09,3;UBERON:0002368,4.39e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.247528499761764,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0.371606350251437,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0,0.626719583092093,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0.179515288819544,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0.171986032471617,0,0.219267951258557,0,0.0969890164884194,0,1.58186518546373,0,0,0.189932387867636,0.195551382734803,0,0,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.423366660328922,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0,0,1.32506888912221,0.129282956361551,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0.169732529954025,0.212574920101683,0.247871528518004,0,0,0.157723490002507,0,0,0.3062454773532,0.192687675289379,0,0.478901577171454,0.205116364240755,0.504143392443436,0.276629009856872,0,0,0,0,0.183428598521679,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.826747186004736,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,11.249738553444,31.9469536107883,0,0.455324382702595,0,0.806637912890455,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,1.43325506366115,3.4308741204795,0.316027223465453,0.116241425368125,0,0,0.207216164163037,0.3414369541879,0,0,0,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0.223710863595585,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0.305966489225945,0.534434810531121,0.0918948995348449,0,0,1.07185652062471,0,0.20686599172379,0,0,0.0645889098360061,0,0.33639558774184,0.0636471582781649,0,0,0,0.0673520530145875,0,0.332660356546013,0,0.426909383510862,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:52940616..52940641,- | |||
}} |
Latest revision as of 09:05, 28 July 2015
Short description: | p@chr1:52940616..52940641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:52940616..52940641, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.79e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.37e-13 | 2 |
developing epithelial placode | 1.37e-13 | 2 |
respiratory system arterial blood vessel | 1.37e-13 | 2 |
respiratory system blood vessel | 1.37e-13 | 2 |
respiratory system artery | 1.37e-13 | 2 |
head blood vessel | 1.37e-13 | 2 |
pulmonary artery | 1.37e-13 | 2 |
pulmonary vascular system | 1.37e-13 | 2 |
pharyngeal vasculature | 1.37e-13 | 2 |
truncus arteriosus | 1.37e-13 | 2 |
aortic sac | 1.37e-13 | 2 |
pharyngeal arch artery | 1.37e-13 | 2 |
outflow tract | 1.67e-09 | 3 |
endocrine gland | 4.39e-07 | 35 |