FFCP PHASE1:Hg19::chr1:6419175..6419204,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:6419175..6419204,+ | |||
|coexpression_cluster_id=C2992 | |||
|description=CAGE_peak_at_chr1:6419175..6419204,+ | |description=CAGE_peak_at_chr1:6419175..6419204,+ | ||
|id=chr1:6419175..6419204,+ | |id=chr1:6419175..6419204,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.96e-15!18;CL:0000789!1.96e-15!18;CL:0002420!1.96e-15!18;CL:0002419!1.96e-15!18;CL:0000790!1.96e-15!18;CL:0000738!8.47e-14!140;CL:0000624!2.23e-13!6;CL:0000037!5.02e-13!172;CL:0000566!5.02e-13!172;CL:0000542!2.60e-12!53;CL:0000051!2.60e-12!53;CL:0000988!1.22e-11!182;CL:0000838!2.17e-11!52;CL:0002032!9.36e-11!165;CL:0000837!9.36e-11!165;CL:0000084!3.34e-10!25;CL:0000827!3.34e-10!25;CL:0002031!1.93e-09!124;CL:0000623!1.08e-07!3;CL:0000825!1.08e-07!3;CL:0002087!1.60e-07!119;CL:0000767!2.14e-07!3;CL:0000898!3.17e-07!3;CL:0000784!6.89e-07!3;CL:0000625!9.76e-07!11 | |ontology_enrichment_celltype=CL:0000791!1.96e-15!18;CL:0000789!1.96e-15!18;CL:0002420!1.96e-15!18;CL:0002419!1.96e-15!18;CL:0000790!1.96e-15!18;CL:0000738!8.47e-14!140;CL:0000624!2.23e-13!6;CL:0000037!5.02e-13!172;CL:0000566!5.02e-13!172;CL:0000542!2.60e-12!53;CL:0000051!2.60e-12!53;CL:0000988!1.22e-11!182;CL:0000838!2.17e-11!52;CL:0002032!9.36e-11!165;CL:0000837!9.36e-11!165;CL:0000084!3.34e-10!25;CL:0000827!3.34e-10!25;CL:0002031!1.93e-09!124;CL:0000623!1.08e-07!3;CL:0000825!1.08e-07!3;CL:0002087!1.60e-07!119;CL:0000767!2.14e-07!3;CL:0000898!3.17e-07!3;CL:0000784!6.89e-07!3;CL:0000625!9.76e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.01e-23;18!CL:0000789;1.01e-23;18!CL:0002419;1.01e-23;18!CL:0000623;1.55e-21;3!CL:0000624;2.14e-19;6!CL:0000084;8.99e-17;25!CL:0000097;1.18e-13;5!CL:0000625;4.00e-10;11!CL:0000767;6.50e-10;3!CL:0000542;1.64e-09;53!CL:0000895;1.09e-08;1!CL:0002032;4.72e-08;1!CL:0000037;4.72e-08;1!CL:0001024;4.72e-08;1!CL:0000557;4.72e-08;1!CL:0000163;8.58e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.34e-24,18;CL:0000789,8.34e-24,18;CL:0002420,8.34e-24,18;CL:0002419,8.34e-24,18;CL:0000790,8.34e-24,18;CL:0000623,1.26e-21,3;CL:0000825,1.26e-21,3;CL:0000624,2.15e-19,6;CL:0000838,4.73e-17,52;CL:0000084,7.83e-17,25;CL:0000827,7.83e-17,25;CL:0000542,1.09e-16,53;CL:0000051,1.09e-16,53;CL:0000738,1.04e-14,136;CL:0000037,3.96e-14,168;CL:0000097,1.06e-13,5;CL:0002028,1.06e-13,5;CL:0002031,2.16e-13,120;CL:0002032,2.40e-13,161;CL:0000837,2.40e-13,161;CL:0000988,3.29e-13,177;CL:0000625,3.42e-10,11;CL:0000767,4.31e-10,3;CL:0000810,1.13e-08,1;CL:0000895,1.13e-08,1;CL:0002436,1.13e-08,1;CL:0002427,1.13e-08,1;CL:0002428,1.13e-08,1;CL:0002429,1.13e-08,1;CL:0002433,1.13e-08,1;CL:0002431,1.13e-08,1;CL:0002432,1.13e-08,1;CL:0001024,6.24e-08,1;CL:0000163,8.10e-08,9;CL:0002087,1.16e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.01e-23;18!CL:0000051;1.64e-09;53!CL:0002427;1.09e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;4.72e-08;1!DOID:2355;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.82e-08,1;DOID:5662,7.16e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.91914699048606,1.54816123316076,0,0,0,0,0,1.17440175733939,0.553995408531877,0.401088894940283,1.30206522429511,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,1.31692042387539,3.14735632182133,3.93010762749165,3.70082698199117,0,0.32592226663359,0,0,0.222820913770347,0.883817722424512,1.10766947291811,0.812411591295047,0,0.130059347559878,0.164437904603676,0,0.289803085735052,2.07601188426885,1.33770414044857,2.09071047609954,0,6.13152789763074,6.52892146416997,3.03623630423403,0,0,0,0.752875595388864,0,1.24930726552346,0,0.821127996921047,1.81446068902259,1.60464117470104,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93923419527467,9.36779697210249,4.92345490362882,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,2.58753089831421,2.82354679815446,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,1.18542664892098,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0.899895566206002,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,1.02892805662451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.448527450322454,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.91914699048606,1.54816123316076,0,0,0,0,0,1.17440175733939,0.553995408531877,0.401088894940283,1.30206522429511,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,1.31692042387539,3.14735632182133,3.93010762749165,3.70082698199117,0,0.32592226663359,0,0,0.222820913770347,0.883817722424512,1.10766947291811,0.812411591295047,0,0.130059347559878,0.164437904603676,0,0.289803085735052,2.07601188426885,1.33770414044857,2.09071047609954,0,6.13152789763074,6.52892146416997,3.03623630423403,0,0,0,0.752875595388864,0,1.24930726552346,0,0.821127996921047,1.81446068902259,1.60464117470104,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93923419527467,9.36779697210249,4.92345490362882,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,2.58753089831421,2.82354679815446,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,1.18542664892098,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0.899895566206002,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,1.02892805662451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.448527450322454,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr1:6419175..6419204,+ | |short_description=p@chr1:6419175..6419204,+ | ||
}} | }} |
Latest revision as of 09:41, 28 July 2015
Short description: | p@chr1:6419175..6419204, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:6419175..6419204, + |
Coexpression cluster: | C2992_Mast_CD4_immature_CD8_Natural_CD19_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anemia | 5.82e-08 | 1 |
pleomorphic carcinoma | 7.16e-08 | 1 |