FFCP PHASE1:Hg19::chr1:91328490..91328494,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:91328490..91328494,-
|short_description=p@chr1:91328490..91328494,-
|description=CAGE_peak_at_chr1:91328490..91328494,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:91328490..91328494,- | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_at_chr1:91328490..91328494,- | |||
|id=chr1:91328490..91328494,- | |||
|ontology_enrichment_celltype=CL:0000945!5.40e-09!24;CL:0000826!5.40e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0002379;5.22e-26;1!CL:0000054;1.00e-13;2!CL:0000137;1.00e-13;2!CL:0000092;1.00e-13;2!CL:0002092;5.55e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,5.93e-26,1;CL:0000054,8.28e-14,2;CL:0000137,8.28e-14,2;CL:0000092,8.28e-14,2;CL:0002092,5.15e-11,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.12e-17!239;DOID:162!2.53e-14!235;DOID:2531!3.83e-10!51;DOID:0060083!3.83e-10!51;DOID:4231!2.05e-09!2;DOID:1907!2.05e-09!2;DOID:1115!4.79e-09!20;DOID:74!1.39e-08!2;DOID:0050686!2.24e-08!137;DOID:201!6.81e-07!6;DOID:0060100!6.81e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:4960;2.16e-26;1!DOID:0070004;2.16e-26;1!DOID:0060085;5.22e-26;1!DOID:3165;5.22e-26;1!DOID:0060121;5.22e-26;1!DOID:3620;5.22e-26;1!DOID:2438;5.22e-26;1!DOID:4418;5.22e-26;1!DOID:3565;5.22e-26;1!DOID:201;2.19e-17;6!DOID:0060100;2.19e-17;6!DOID:200;1.00e-13;2!DOID:4305;1.00e-13;2!DOID:4231;1.46e-13;2!DOID:1907;1.46e-13;2!DOID:0060072;1.64e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.16e-26,1;DOID:0070004,2.16e-26,1;DOID:0060085,3.58e-26,1;DOID:3165,3.58e-26,1;DOID:0060121,3.58e-26,1;DOID:2438,3.58e-26,1;DOID:4418,3.58e-26,1;DOID:3620,5.93e-26,1;DOID:3565,5.93e-26,1;DOID:201,1.85e-17,6;DOID:0060100,1.85e-17,6;DOID:200,8.28e-14,2;DOID:4305,8.28e-14,2;DOID:4231,1.37e-13,2;DOID:1907,1.37e-13,2;DOID:0060072,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002046!7.26e-08!5;UBERON:0004117!7.26e-08!5;UBERON:0007689!7.26e-08!5;UBERON:0007123!7.26e-08!5;UBERON:0003091!7.26e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.22e-26;1!UBERON:0002371;2.41e-19;12!UBERON:0001474;3.77e-13;18!UBERON:0004765;2.59e-09;26!UBERON:0002405;5.43e-09;27!UBERON:0002390;9.28e-08;32!UBERON:0000014;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.61e-26,1;UBERON:0000014,1.49e-07,4 | |||
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| ||
|short_description=p@chr1:91328490..91328494,- | |||
}} | }} |
Latest revision as of 11:14, 28 July 2015
Short description: | p@chr1:91328490..91328494, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:91328490..91328494, - |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 5.93e-26 | 1 |
bone matrix secreting cell | 8.28e-14 | 2 |
osteocyte | 8.28e-14 | 2 |
osteoclast | 8.28e-14 | 2 |
bone marrow cell | 5.15e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.61e-26 | 1 |
zone of skin | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.16e-26 | 1 |
myeloma | 2.16e-26 | 1 |
organ system benign neoplasm | 3.58e-26 | 1 |
skin benign neoplasm | 3.58e-26 | 1 |
integumentary system benign neoplasm | 3.58e-26 | 1 |
dermis tumor | 3.58e-26 | 1 |
cutaneous fibrous histiocytoma | 3.58e-26 | 1 |
central nervous system cancer | 5.93e-26 | 1 |
meningioma | 5.93e-26 | 1 |
connective tissue cancer | 1.85e-17 | 6 |
musculoskeletal system cancer | 1.85e-17 | 6 |
giant cell tumor | 8.28e-14 | 2 |
bone giant cell tumor | 8.28e-14 | 2 |
histiocytoma | 1.37e-13 | 2 |
malignant fibroxanthoma | 1.37e-13 | 2 |
benign neoplasm | 1.49e-07 | 4 |