FFCP PHASE1:Hg19::chr1:98409165..98409171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:98409165..98409171,+ | |||
|coexpression_cluster_id=C4001 | |coexpression_cluster_id=C4001 | ||
|description=CAGE_peak_at_chr1:98409165..98409171,+ | |description=CAGE_peak_at_chr1:98409165..98409171,+ | ||
|id=chr1:98409165..98409171,+ | |id=chr1:98409165..98409171,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.16e-21!180;CL:0000359!6.99e-21!32;CL:0002620!1.16e-18!23;CL:0000192!1.14e-14!42;CL:0000514!1.14e-14!42;CL:0000057!3.67e-13!75;CL:0000680!9.90e-11!57;CL:0000056!9.90e-11!57;CL:0000355!9.90e-11!57;CL:0000187!2.60e-10!54;CL:0000393!5.15e-10!60;CL:0000211!5.15e-10!60;CL:0000183!4.89e-09!59;CL:0000222!5.97e-09!119;CL:0002539!9.75e-09!10;CL:0002595!3.12e-08!5 | |ontology_enrichment_celltype=CL:0000055!3.16e-21!180;CL:0000359!6.99e-21!32;CL:0002620!1.16e-18!23;CL:0000192!1.14e-14!42;CL:0000514!1.14e-14!42;CL:0000057!3.67e-13!75;CL:0000680!9.90e-11!57;CL:0000056!9.90e-11!57;CL:0000355!9.90e-11!57;CL:0000187!2.60e-10!54;CL:0000393!5.15e-10!60;CL:0000211!5.15e-10!60;CL:0000183!4.89e-09!59;CL:0000222!5.97e-09!119;CL:0002539!9.75e-09!10;CL:0002595!3.12e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.47e-15;4!CL:0002547;2.47e-15;4!CL:0002539;1.67e-13;10!CL:0000359;2.23e-10;32!CL:0002589;2.07e-08;2!CL:0000192;9.39e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.96e-15,4;CL:0002547,2.96e-15,4;CL:0002539,2.16e-13,10;CL:0000359,4.25e-11,32;CL:0002589,2.67e-08,2;CL:0000192,3.00e-08,43;CL:0000514,3.00e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000514;9.39e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.26e-33!42;UBERON:0003509!5.26e-33!42;UBERON:0004572!5.26e-33!42;UBERON:0004573!5.35e-31!33;UBERON:0004571!5.35e-31!33;UBERON:0001981!4.23e-28!60;UBERON:0007500!4.23e-28!60;UBERON:0004537!4.23e-28!60;UBERON:0006965!4.23e-28!60;UBERON:0000055!5.17e-25!69;UBERON:0002049!1.09e-20!79;UBERON:0007798!1.09e-20!79;UBERON:0004872!1.51e-17!84;UBERON:0000947!1.13e-14!21;UBERON:0010191!1.13e-14!21;UBERON:0004535!2.06e-12!110;UBERON:0002097!3.45e-12!40;UBERON:0001009!7.31e-12!113;UBERON:0002199!1.02e-11!45;UBERON:0002416!1.02e-11!45;UBERON:0000914!3.40e-11!83;UBERON:0002329!3.40e-11!83;UBERON:0003077!3.40e-11!83;UBERON:0003059!3.40e-11!83;UBERON:0007282!3.40e-11!83;UBERON:0009618!3.40e-11!83;UBERON:0007285!3.40e-11!83;UBERON:0004290!7.13e-11!70;UBERON:0003914!3.90e-10!118;UBERON:0001134!1.07e-09!61;UBERON:0002036!1.07e-09!61;UBERON:0003082!1.07e-09!61;UBERON:0000486!2.46e-09!82;UBERON:0002385!3.12e-09!63;UBERON:0001015!3.12e-09!63;UBERON:0000383!3.12e-09!63;UBERON:0000490!9.51e-09!138;UBERON:0004237!9.75e-09!10;UBERON:0004695!9.75e-09!10;UBERON:0002111!9.75e-09!10;UBERON:0004178!9.75e-09!10;UBERON:0003834!3.12e-08!5;UBERON:0001533!3.12e-08!5;UBERON:0003513!1.67e-07!8 | |ontology_enrichment_uberon=UBERON:0001637!5.26e-33!42;UBERON:0003509!5.26e-33!42;UBERON:0004572!5.26e-33!42;UBERON:0004573!5.35e-31!33;UBERON:0004571!5.35e-31!33;UBERON:0001981!4.23e-28!60;UBERON:0007500!4.23e-28!60;UBERON:0004537!4.23e-28!60;UBERON:0006965!4.23e-28!60;UBERON:0000055!5.17e-25!69;UBERON:0002049!1.09e-20!79;UBERON:0007798!1.09e-20!79;UBERON:0004872!1.51e-17!84;UBERON:0000947!1.13e-14!21;UBERON:0010191!1.13e-14!21;UBERON:0004535!2.06e-12!110;UBERON:0002097!3.45e-12!40;UBERON:0001009!7.31e-12!113;UBERON:0002199!1.02e-11!45;UBERON:0002416!1.02e-11!45;UBERON:0000914!3.40e-11!83;UBERON:0002329!3.40e-11!83;UBERON:0003077!3.40e-11!83;UBERON:0003059!3.40e-11!83;UBERON:0007282!3.40e-11!83;UBERON:0009618!3.40e-11!83;UBERON:0007285!3.40e-11!83;UBERON:0004290!7.13e-11!70;UBERON:0003914!3.90e-10!118;UBERON:0001134!1.07e-09!61;UBERON:0002036!1.07e-09!61;UBERON:0003082!1.07e-09!61;UBERON:0000486!2.46e-09!82;UBERON:0002385!3.12e-09!63;UBERON:0001015!3.12e-09!63;UBERON:0000383!3.12e-09!63;UBERON:0000490!9.51e-09!138;UBERON:0004237!9.75e-09!10;UBERON:0004695!9.75e-09!10;UBERON:0002111!9.75e-09!10;UBERON:0004178!9.75e-09!10;UBERON:0003834!3.12e-08!5;UBERON:0001533!3.12e-08!5;UBERON:0003513!1.67e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.48e-24;33!UBERON:0004571;2.48e-24;33!UBERON:0000947;3.37e-24;21!UBERON:0010191;3.37e-24;21!UBERON:0001637;2.97e-19;42!UBERON:0003509;2.97e-19;42!UBERON:0004572;2.97e-19;42!UBERON:0004797;2.47e-15;4!UBERON:0000415;2.47e-15;4!UBERON:0007240;2.47e-15;4!UBERON:0005742;2.47e-15;4!UBERON:0005734;2.47e-15;4!UBERON:0004664;2.47e-15;4!UBERON:0004663;2.47e-15;4!UBERON:0004237;1.67e-13;10!UBERON:0004695;1.67e-13;10!UBERON:0002111;1.67e-13;10!UBERON:0004178;1.67e-13;10!UBERON:0001135;3.39e-09;15!UBERON:0001529;2.07e-08;2!UBERON:0007204;2.07e-08;2!UBERON:0007500;2.33e-07;56!UBERON:0001981;2.33e-07;56!UBERON:0004537;2.33e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,8.07e-27,33;UBERON:0004571,8.07e-27,33;UBERON:0000947,4.31e-24,21;UBERON:0010191,4.31e-24,21;UBERON:0001637,5.99e-21,42;UBERON:0003509,5.99e-21,42;UBERON:0004572,5.99e-21,42;UBERON:0000415,2.96e-15,4;UBERON:0007240,2.96e-15,4;UBERON:0005742,2.96e-15,4;UBERON:0005734,2.96e-15,4;UBERON:0004664,2.96e-15,4;UBERON:0004663,2.96e-15,4;UBERON:0007500,9.95e-15,59;UBERON:0001981,9.95e-15,59;UBERON:0004537,9.95e-15,59;UBERON:0006965,9.95e-15,59;UBERON:0004237,2.16e-13,10;UBERON:0004695,2.16e-13,10;UBERON:0002111,2.16e-13,10;UBERON:0004178,2.16e-13,10;UBERON:0000055,1.09e-12,68;UBERON:0002049,5.69e-11,78;UBERON:0007798,5.69e-11,78;UBERON:0004872,2.89e-10,83;UBERON:0001135,4.01e-09,15;UBERON:0004797,4.04e-09,7;UBERON:0001529,2.67e-08,2;UBERON:0007204,2.67e-08,2;UBERON:0004535,1.23e-07,109;UBERON:0001009,2.07e-07,112;UBERON:0003914,4.64e-07,117 | |||
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|short_description=p@chr1:98409165..98409171,+ | |short_description=p@chr1:98409165..98409171,+ | ||
}} | }} |
Latest revision as of 11:41, 28 July 2015
Short description: | p@chr1:98409165..98409171, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:98409165..98409171, + |
Coexpression cluster: | C4001_Fibroblast_Smooth_mesenchymal_Mesenchymal_mesothelioma_thyroid_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.96e-15 | 4 |
fibroblast of the aortic adventitia | 2.96e-15 | 4 |
aortic smooth muscle cell | 2.16e-13 | 10 |
vascular associated smooth muscle cell | 4.25e-11 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 2.67e-08 | 2 |
smooth muscle cell | 3.00e-08 | 43 |
smooth muscle myoblast | 3.00e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 8.07e-27 | 33 |
systemic arterial system | 8.07e-27 | 33 |
aorta | 4.31e-24 | 21 |
aortic system | 4.31e-24 | 21 |
artery | 5.99e-21 | 42 |
arterial blood vessel | 5.99e-21 | 42 |
arterial system | 5.99e-21 | 42 |
artery wall | 2.96e-15 | 4 |
tunica adventitia of artery | 2.96e-15 | 4 |
adventitia | 2.96e-15 | 4 |
tunica adventitia of blood vessel | 2.96e-15 | 4 |
aorta tunica adventitia | 2.96e-15 | 4 |
aorta wall | 2.96e-15 | 4 |
epithelial tube open at both ends | 9.95e-15 | 59 |
blood vessel | 9.95e-15 | 59 |
blood vasculature | 9.95e-15 | 59 |
vascular cord | 9.95e-15 | 59 |
blood vessel smooth muscle | 2.16e-13 | 10 |
arterial system smooth muscle | 2.16e-13 | 10 |
artery smooth muscle tissue | 2.16e-13 | 10 |
aorta smooth muscle tissue | 2.16e-13 | 10 |
vessel | 1.09e-12 | 68 |
vasculature | 5.69e-11 | 78 |
vascular system | 5.69e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 2.89e-10 | 83 |
smooth muscle tissue | 4.01e-09 | 15 |
blood vessel layer | 4.04e-09 | 7 |
brachiocephalic artery | 2.67e-08 | 2 |
brachiocephalic vasculature | 2.67e-08 | 2 |
cardiovascular system | 1.23e-07 | 109 |
circulatory system | 2.07e-07 | 112 |
epithelial tube | 4.64e-07 | 117 |